Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNRC18O15417 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.07■■□□□ 1.44
TNRC18O15417 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
TNRC18O15417 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.06■■□□□ 1.44
TNRC18O15417 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
TNRC18O15417 TPM4P1-201ENST00000436100 807 ntBASIC24.06■■□□□ 1.44
TNRC18O15417 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.06■■□□□ 1.44
TNRC18O15417 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.06■■□□□ 1.44
TNRC18O15417 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.06■■□□□ 1.44
TNRC18O15417 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.06■■□□□ 1.44
TNRC18O15417 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.06■■□□□ 1.44
TNRC18O15417 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNRC18O15417 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TNRC18O15417 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.06■■□□□ 1.44
TNRC18O15417 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.05■■□□□ 1.44
TNRC18O15417 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC18O15417 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TNRC18O15417 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
TNRC18O15417 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.05■■□□□ 1.44
TNRC18O15417 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC18O15417 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.04■■□□□ 1.44
TNRC18O15417 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.04■■□□□ 1.44
TNRC18O15417 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.04■■□□□ 1.44
TNRC18O15417 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 RPS2P55-201ENST00000397318 883 ntBASIC24.04■■□□□ 1.44
TNRC18O15417 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.04■■□□□ 1.44
TNRC18O15417 AC107956.1-201ENST00000494359 873 ntBASIC24.04■■□□□ 1.44
TNRC18O15417 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.04■■□□□ 1.44
TNRC18O15417 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC18O15417 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.03■■□□□ 1.44
TNRC18O15417 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.03■■□□□ 1.44
TNRC18O15417 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.03■■□□□ 1.44
TNRC18O15417 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.03■■□□□ 1.44
TNRC18O15417 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC18O15417 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.03■■□□□ 1.44
TNRC18O15417 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.03■■□□□ 1.44
TNRC18O15417 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TNRC18O15417 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
TNRC18O15417 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNRC18O15417 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.02■■□□□ 1.44
TNRC18O15417 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TNRC18O15417 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TNRC18O15417 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNRC18O15417 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.02■■□□□ 1.44
TNRC18O15417 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TNRC18O15417 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.01■■□□□ 1.43
TNRC18O15417 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TNRC18O15417 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.01■■□□□ 1.43
TNRC18O15417 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.01■■□□□ 1.43
TNRC18O15417 AC233702.5-201ENST00000584107 538 ntBASIC24.01■■□□□ 1.43
TNRC18O15417 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.01■■□□□ 1.43
TNRC18O15417 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.01■■□□□ 1.43
TNRC18O15417 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TNRC18O15417 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TNRC18O15417 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24■■□□□ 1.43
TNRC18O15417 KRT17P2-201ENST00000300992 1314 ntBASIC24■■□□□ 1.43
TNRC18O15417 AC005224.4-201ENST00000583262 1652 ntBASIC24■■□□□ 1.43
TNRC18O15417 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
TNRC18O15417 AC008694.1-202ENST00000636953 945 ntBASIC24■■□□□ 1.43
TNRC18O15417 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.99■■□□□ 1.43
TNRC18O15417 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.99■■□□□ 1.43
TNRC18O15417 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.99■■□□□ 1.43
TNRC18O15417 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.99■■□□□ 1.43
TNRC18O15417 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TNRC18O15417 RN7SL471P-201ENST00000580476 299 ntBASIC23.99■■□□□ 1.43
TNRC18O15417 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC18O15417 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC18O15417 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC18O15417 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.98■■□□□ 1.43
TNRC18O15417 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.98■■□□□ 1.43
TNRC18O15417 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.98■■□□□ 1.43
TNRC18O15417 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.98■■□□□ 1.43
TNRC18O15417 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.98■■□□□ 1.43
TNRC18O15417 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC18O15417 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC18O15417 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC18O15417 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.98■■□□□ 1.43
TNRC18O15417 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms