Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 MIR3621-201ENST00000580529 85 ntBASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.9■□□□□ 0.78
CPSF4LA6NMK7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPSF4LA6NMK7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CPSF4LA6NMK7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPSF4LA6NMK7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 AL031602.1-201ENST00000633169 911 ntBASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPSF4LA6NMK7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPSF4LA6NMK7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 MIR3181-201ENST00000578512 73 ntBASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 AC026310.3-201ENST00000625186 2373 ntBASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.86■□□□□ 0.77
CPSF4LA6NMK7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.85■□□□□ 0.77
CPSF4LA6NMK7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms