Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-2A0A0B4J237 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV8-2A0A0B4J237 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV8-2A0A0B4J237 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 AL031602.1-201ENST00000633169 911 ntBASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-2A0A0B4J237 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-2A0A0B4J237 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-2A0A0B4J237 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 MIR3181-201ENST00000578512 73 ntBASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 FAM99A-202ENST00000538190 1989 ntBASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-2A0A0B4J237 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 AL512631.2-201ENST00000604634 923 ntBASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-2A0A0B4J237 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-2A0A0B4J237 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms