Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv13-1A0A0B4J1P8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Smad6-203ENSMUST00000179458 273 ntBASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm5874-201ENSMUST00000096101 508 ntBASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv13-1A0A0B4J1P8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms