Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf135Q9CWS1 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.3■■□□□ 1.8
Rnf135Q9CWS1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf135Q9CWS1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf135Q9CWS1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.3■■□□□ 1.8
Rnf135Q9CWS1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf135Q9CWS1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf135Q9CWS1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf135Q9CWS1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf135Q9CWS1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Rnf135Q9CWS1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf135Q9CWS1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Rnf135Q9CWS1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rnf135Q9CWS1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.24■■□□□ 1.79
Rnf135Q9CWS1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf135Q9CWS1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf135Q9CWS1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rnf135Q9CWS1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
Rnf135Q9CWS1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf135Q9CWS1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Rnf135Q9CWS1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf135Q9CWS1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf135Q9CWS1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.16■■□□□ 1.78
Rnf135Q9CWS1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.16■■□□□ 1.78
Rnf135Q9CWS1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf135Q9CWS1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.16■■□□□ 1.78
Rnf135Q9CWS1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf135Q9CWS1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rnf135Q9CWS1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Rnf135Q9CWS1 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.14■■□□□ 1.78
Rnf135Q9CWS1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rnf135Q9CWS1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rnf135Q9CWS1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.12■■□□□ 1.77
Rnf135Q9CWS1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf135Q9CWS1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rnf135Q9CWS1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
Rnf135Q9CWS1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rnf135Q9CWS1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rnf135Q9CWS1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rnf135Q9CWS1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Rnf135Q9CWS1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rnf135Q9CWS1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rnf135Q9CWS1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 Peli2-204ENSMUST00000226513 1320 ntBASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rnf135Q9CWS1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rnf135Q9CWS1 Amer2-203ENSMUST00000225247 2662 ntBASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf135Q9CWS1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf135Q9CWS1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rnf135Q9CWS1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rnf135Q9CWS1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf135Q9CWS1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
Rnf135Q9CWS1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rnf135Q9CWS1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Rnf135Q9CWS1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Rnf135Q9CWS1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf135Q9CWS1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf135Q9CWS1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf135Q9CWS1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf135Q9CWS1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rnf135Q9CWS1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rnf135Q9CWS1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Rnf135Q9CWS1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rnf135Q9CWS1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rnf135Q9CWS1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rnf135Q9CWS1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.92■■□□□ 1.74
Rnf135Q9CWS1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.91■■□□□ 1.74
Rnf135Q9CWS1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf135Q9CWS1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.9■■□□□ 1.74
Rnf135Q9CWS1 Gm16148-201ENSMUST00000119653 893 ntBASIC25.89■■□□□ 1.74
Rnf135Q9CWS1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf135Q9CWS1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf135Q9CWS1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf135Q9CWS1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf135Q9CWS1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Rnf135Q9CWS1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rnf135Q9CWS1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rnf135Q9CWS1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rnf135Q9CWS1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf135Q9CWS1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rnf135Q9CWS1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rnf135Q9CWS1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.83■■□□□ 1.73
Rnf135Q9CWS1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rnf135Q9CWS1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Rnf135Q9CWS1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Rnf135Q9CWS1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Rnf135Q9CWS1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rnf135Q9CWS1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rnf135Q9CWS1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rnf135Q9CWS1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rnf135Q9CWS1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Rnf135Q9CWS1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms