Protein–RNA interactions for Protein: Q99MB3

Tm2d1, TM2 domain-containing protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm2d1Q99MB3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tm2d1Q99MB3 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.74■□□□□ 0.75
Tm2d1Q99MB3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tm2d1Q99MB3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tm2d1Q99MB3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tm2d1Q99MB3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm2d1Q99MB3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm2d1Q99MB3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tm2d1Q99MB3 Mipep-204ENSMUST00000225043 1548 ntBASIC19.68■□□□□ 0.74
Tm2d1Q99MB3 Gm25262-201ENSMUST00000174934 133 ntBASIC19.67■□□□□ 0.74
Tm2d1Q99MB3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm2d1Q99MB3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm2d1Q99MB3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm2d1Q99MB3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.66■□□□□ 0.74
Tm2d1Q99MB3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tm2d1Q99MB3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.66■□□□□ 0.74
Tm2d1Q99MB3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tm2d1Q99MB3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tm2d1Q99MB3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tm2d1Q99MB3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tm2d1Q99MB3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tm2d1Q99MB3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.63■□□□□ 0.73
Tm2d1Q99MB3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
Tm2d1Q99MB3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm2d1Q99MB3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tm2d1Q99MB3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tm2d1Q99MB3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tm2d1Q99MB3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tm2d1Q99MB3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tm2d1Q99MB3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tm2d1Q99MB3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm2d1Q99MB3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tm2d1Q99MB3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tm2d1Q99MB3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tm2d1Q99MB3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tm2d1Q99MB3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tm2d1Q99MB3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tm2d1Q99MB3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tm2d1Q99MB3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Tm2d1Q99MB3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tm2d1Q99MB3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tm2d1Q99MB3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tm2d1Q99MB3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tm2d1Q99MB3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tm2d1Q99MB3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tm2d1Q99MB3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tm2d1Q99MB3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tm2d1Q99MB3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tm2d1Q99MB3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tm2d1Q99MB3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tm2d1Q99MB3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tm2d1Q99MB3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tm2d1Q99MB3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tm2d1Q99MB3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Tm2d1Q99MB3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tm2d1Q99MB3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tm2d1Q99MB3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.44■□□□□ 0.7
Tm2d1Q99MB3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.42■□□□□ 0.7
Tm2d1Q99MB3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.42■□□□□ 0.7
Tm2d1Q99MB3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tm2d1Q99MB3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
Tm2d1Q99MB3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tm2d1Q99MB3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm2d1Q99MB3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm2d1Q99MB3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tm2d1Q99MB3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Tm2d1Q99MB3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tm2d1Q99MB3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm2d1Q99MB3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.37■□□□□ 0.69
Tm2d1Q99MB3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.37■□□□□ 0.69
Tm2d1Q99MB3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tm2d1Q99MB3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tm2d1Q99MB3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.35■□□□□ 0.69
Tm2d1Q99MB3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm2d1Q99MB3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tm2d1Q99MB3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tm2d1Q99MB3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tm2d1Q99MB3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tm2d1Q99MB3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tm2d1Q99MB3 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.32■□□□□ 0.68
Tm2d1Q99MB3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tm2d1Q99MB3 Gm27322-201ENSMUST00000184007 104 ntBASIC19.3■□□□□ 0.68
Tm2d1Q99MB3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tm2d1Q99MB3 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.3■□□□□ 0.68
Tm2d1Q99MB3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tm2d1Q99MB3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tm2d1Q99MB3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Tm2d1Q99MB3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tm2d1Q99MB3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm2d1Q99MB3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm2d1Q99MB3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tm2d1Q99MB3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tm2d1Q99MB3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tm2d1Q99MB3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tm2d1Q99MB3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tm2d1Q99MB3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tm2d1Q99MB3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tm2d1Q99MB3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tm2d1Q99MB3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tm2d1Q99MB3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms