Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb2Q91XX7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb2Q91XX7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.6■■□□□ 1.37
Pcdhgb2Q91XX7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb2Q91XX7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pcdhgb2Q91XX7 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.59■■□□□ 1.37
Pcdhgb2Q91XX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhgb2Q91XX7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb2Q91XX7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb2Q91XX7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhgb2Q91XX7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhgb2Q91XX7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhgb2Q91XX7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhgb2Q91XX7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhgb2Q91XX7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhgb2Q91XX7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhgb2Q91XX7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhgb2Q91XX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb2Q91XX7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb2Q91XX7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhgb2Q91XX7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Pcdhgb2Q91XX7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb2Q91XX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb2Q91XX7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb2Q91XX7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhgb2Q91XX7 Gm27322-201ENSMUST00000184007 104 ntBASIC23.48■■□□□ 1.35
Pcdhgb2Q91XX7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhgb2Q91XX7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhgb2Q91XX7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pcdhgb2Q91XX7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.47■■□□□ 1.35
Pcdhgb2Q91XX7 Amer2-203ENSMUST00000225247 2662 ntBASIC23.47■■□□□ 1.35
Pcdhgb2Q91XX7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhgb2Q91XX7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.46■■□□□ 1.35
Pcdhgb2Q91XX7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Pcdhgb2Q91XX7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.46■■□□□ 1.35
Pcdhgb2Q91XX7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
Pcdhgb2Q91XX7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Pcdhgb2Q91XX7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb2Q91XX7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
Pcdhgb2Q91XX7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhgb2Q91XX7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Pcdhgb2Q91XX7 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.44■■□□□ 1.34
Pcdhgb2Q91XX7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhgb2Q91XX7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhgb2Q91XX7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Pcdhgb2Q91XX7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.43■■□□□ 1.34
Pcdhgb2Q91XX7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhgb2Q91XX7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb2Q91XX7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhgb2Q91XX7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Pcdhgb2Q91XX7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Pcdhgb2Q91XX7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhgb2Q91XX7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb2Q91XX7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb2Q91XX7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdhgb2Q91XX7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb2Q91XX7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.36■■□□□ 1.33
Pcdhgb2Q91XX7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb2Q91XX7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb2Q91XX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhgb2Q91XX7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhgb2Q91XX7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhgb2Q91XX7 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.33■■□□□ 1.33
Pcdhgb2Q91XX7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhgb2Q91XX7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhgb2Q91XX7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhgb2Q91XX7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgb2Q91XX7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgb2Q91XX7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.3■■□□□ 1.32
Pcdhgb2Q91XX7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgb2Q91XX7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgb2Q91XX7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdhgb2Q91XX7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgb2Q91XX7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.28■■□□□ 1.32
Pcdhgb2Q91XX7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhgb2Q91XX7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgb2Q91XX7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgb2Q91XX7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Pcdhgb2Q91XX7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb2Q91XX7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb2Q91XX7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb2Q91XX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pcdhgb2Q91XX7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb2Q91XX7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdhgb2Q91XX7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgb2Q91XX7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgb2Q91XX7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb2Q91XX7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb2Q91XX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb2Q91XX7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb2Q91XX7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb2Q91XX7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb2Q91XX7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb2Q91XX7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhgb2Q91XX7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhgb2Q91XX7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgb2Q91XX7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb2Q91XX7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgb2Q91XX7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdhgb2Q91XX7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms