Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Rtp1Q8C8C1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29,95■■■□□ 2,39
Rtp1Q8C8C1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,95■■■□□ 2,38
Rtp1Q8C8C1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Rtp1Q8C8C1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rtp1Q8C8C1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Rtp1Q8C8C1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29,9■■■□□ 2,38
Rtp1Q8C8C1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Rtp1Q8C8C1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Rtp1Q8C8C1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Rtp1Q8C8C1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Rtp1Q8C8C1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29,82■■■□□ 2,36
Rtp1Q8C8C1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29,8■■■□□ 2,36
Rtp1Q8C8C1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Rtp1Q8C8C1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29,8■■■□□ 2,36
Rtp1Q8C8C1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Rtp1Q8C8C1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29,79■■■□□ 2,36
Rtp1Q8C8C1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Rtp1Q8C8C1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Rtp1Q8C8C1 Gm43863-201ENSMUST00000203822 1192 ntBASIC29,75■■■□□ 2,35
Rtp1Q8C8C1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Rtp1Q8C8C1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29,74■■■□□ 2,35
Rtp1Q8C8C1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29,74■■■□□ 2,35
Rtp1Q8C8C1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rtp1Q8C8C1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29,72■■■□□ 2,35
Rtp1Q8C8C1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29,71■■■□□ 2,35
Rtp1Q8C8C1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Rtp1Q8C8C1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29,68■■■□□ 2,34
Rtp1Q8C8C1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
Rtp1Q8C8C1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Rtp1Q8C8C1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29,66■■■□□ 2,34
Rtp1Q8C8C1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Rtp1Q8C8C1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29,64■■■□□ 2,34
Rtp1Q8C8C1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Rtp1Q8C8C1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29,62■■■□□ 2,33
Rtp1Q8C8C1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29,62■■■□□ 2,33
Rtp1Q8C8C1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29,62■■■□□ 2,33
Rtp1Q8C8C1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29,61■■■□□ 2,33
Rtp1Q8C8C1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Rtp1Q8C8C1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29,6■■■□□ 2,33
Rtp1Q8C8C1 Gm42809-201ENSMUST00000198429 1138 ntBASIC29,58■■■□□ 2,33
Rtp1Q8C8C1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Rtp1Q8C8C1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29,56■■■□□ 2,32
Rtp1Q8C8C1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Rtp1Q8C8C1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29,55■■■□□ 2,32
Rtp1Q8C8C1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29,55■■■□□ 2,32
Rtp1Q8C8C1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Rtp1Q8C8C1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Rtp1Q8C8C1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Rtp1Q8C8C1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Rtp1Q8C8C1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29,52■■■□□ 2,32
Rtp1Q8C8C1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29,5■■■□□ 2,31
Rtp1Q8C8C1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29,5■■■□□ 2,31
Rtp1Q8C8C1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29,5■■■□□ 2,31
Rtp1Q8C8C1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29,49■■■□□ 2,31
Rtp1Q8C8C1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Rtp1Q8C8C1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Rtp1Q8C8C1 AC157572.2-201ENSMUST00000226970 908 ntBASIC29,47■■■□□ 2,31
Rtp1Q8C8C1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Rtp1Q8C8C1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Rtp1Q8C8C1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Rtp1Q8C8C1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29,43■■■□□ 2,3
Rtp1Q8C8C1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29,43■■■□□ 2,3
Rtp1Q8C8C1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29,4■■■□□ 2,3
Rtp1Q8C8C1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29,4■■■□□ 2,3
Rtp1Q8C8C1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,4■■■□□ 2,3
Rtp1Q8C8C1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29,37■■■□□ 2,29
Rtp1Q8C8C1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29,36■■■□□ 2,29
Rtp1Q8C8C1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29,35■■■□□ 2,29
Rtp1Q8C8C1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29,35■■■□□ 2,29
Rtp1Q8C8C1 Gm7432-201ENSMUST00000210343 879 ntBASIC29,34■■■□□ 2,29
Rtp1Q8C8C1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29,33■■■□□ 2,29
Rtp1Q8C8C1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29,33■■■□□ 2,29
Rtp1Q8C8C1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29,33■■■□□ 2,29
Rtp1Q8C8C1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29,33■■■□□ 2,29
Rtp1Q8C8C1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Rtp1Q8C8C1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29,31■■■□□ 2,28
Rtp1Q8C8C1 Nkain2-201ENSMUST00000092602 558 ntBASIC29,31■■■□□ 2,28
Rtp1Q8C8C1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29,3■■■□□ 2,28
Rtp1Q8C8C1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Rtp1Q8C8C1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29,29■■■□□ 2,28
Rtp1Q8C8C1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29,29■■■□□ 2,28
Rtp1Q8C8C1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29,28■■■□□ 2,28
Rtp1Q8C8C1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Rtp1Q8C8C1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Rtp1Q8C8C1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Rtp1Q8C8C1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Rtp1Q8C8C1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Rtp1Q8C8C1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29,25■■■□□ 2,27
Rtp1Q8C8C1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29,23■■■□□ 2,27
Rtp1Q8C8C1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Rtp1Q8C8C1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29,23■■■□□ 2,27
Rtp1Q8C8C1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29,21■■■□□ 2,27
Rtp1Q8C8C1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29,21■■■□□ 2,27
Rtp1Q8C8C1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29,19■■■□□ 2,26
Rtp1Q8C8C1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Rtp1Q8C8C1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Rtp1Q8C8C1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29,17■■■□□ 2,26
Rtp1Q8C8C1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,16■■■□□ 2,26
Rtp1Q8C8C1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29,15■■■□□ 2,26
Retrieved 100 of 76,532 protein–RNA pairs in 15,5 ms