Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rtp1Q8C8C1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Rtp1Q8C8C1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
Rtp1Q8C8C1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rtp1Q8C8C1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rtp1Q8C8C1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rtp1Q8C8C1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.9■■■□□ 2.38
Rtp1Q8C8C1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rtp1Q8C8C1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rtp1Q8C8C1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rtp1Q8C8C1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rtp1Q8C8C1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Rtp1Q8C8C1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.8■■■□□ 2.36
Rtp1Q8C8C1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Rtp1Q8C8C1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Rtp1Q8C8C1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rtp1Q8C8C1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.79■■■□□ 2.36
Rtp1Q8C8C1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rtp1Q8C8C1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rtp1Q8C8C1 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.75■■■□□ 2.35
Rtp1Q8C8C1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rtp1Q8C8C1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
Rtp1Q8C8C1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.74■■■□□ 2.35
Rtp1Q8C8C1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rtp1Q8C8C1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rtp1Q8C8C1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Rtp1Q8C8C1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rtp1Q8C8C1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rtp1Q8C8C1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rtp1Q8C8C1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rtp1Q8C8C1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtp1Q8C8C1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Rtp1Q8C8C1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Rtp1Q8C8C1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtp1Q8C8C1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtp1Q8C8C1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.62■■■□□ 2.33
Rtp1Q8C8C1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
Rtp1Q8C8C1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.61■■■□□ 2.33
Rtp1Q8C8C1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtp1Q8C8C1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Rtp1Q8C8C1 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.58■■■□□ 2.33
Rtp1Q8C8C1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rtp1Q8C8C1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rtp1Q8C8C1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtp1Q8C8C1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Rtp1Q8C8C1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.55■■■□□ 2.32
Rtp1Q8C8C1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtp1Q8C8C1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtp1Q8C8C1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rtp1Q8C8C1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtp1Q8C8C1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
Rtp1Q8C8C1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.5■■■□□ 2.31
Rtp1Q8C8C1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.5■■■□□ 2.31
Rtp1Q8C8C1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtp1Q8C8C1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Rtp1Q8C8C1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Rtp1Q8C8C1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rtp1Q8C8C1 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.47■■■□□ 2.31
Rtp1Q8C8C1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Rtp1Q8C8C1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Rtp1Q8C8C1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rtp1Q8C8C1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rtp1Q8C8C1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Rtp1Q8C8C1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.4■■■□□ 2.3
Rtp1Q8C8C1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.4■■■□□ 2.3
Rtp1Q8C8C1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rtp1Q8C8C1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.37■■■□□ 2.29
Rtp1Q8C8C1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Rtp1Q8C8C1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.35■■■□□ 2.29
Rtp1Q8C8C1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
Rtp1Q8C8C1 Gm7432-201ENSMUST00000210343 879 ntBASIC29.34■■■□□ 2.29
Rtp1Q8C8C1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Rtp1Q8C8C1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rtp1Q8C8C1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Rtp1Q8C8C1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Rtp1Q8C8C1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rtp1Q8C8C1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
Rtp1Q8C8C1 Nkain2-201ENSMUST00000092602 558 ntBASIC29.31■■■□□ 2.28
Rtp1Q8C8C1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Rtp1Q8C8C1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Rtp1Q8C8C1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Rtp1Q8C8C1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rtp1Q8C8C1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rtp1Q8C8C1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Rtp1Q8C8C1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Rtp1Q8C8C1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rtp1Q8C8C1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rtp1Q8C8C1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rtp1Q8C8C1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rtp1Q8C8C1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Rtp1Q8C8C1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtp1Q8C8C1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.23■■■□□ 2.27
Rtp1Q8C8C1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.21■■■□□ 2.27
Rtp1Q8C8C1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rtp1Q8C8C1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Rtp1Q8C8C1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rtp1Q8C8C1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtp1Q8C8C1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtp1Q8C8C1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rtp1Q8C8C1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms