Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.63■■■□□ 2.01
Lin9Q8C735 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Lin9Q8C735 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Lin9Q8C735 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.6■■■□□ 2.01
Lin9Q8C735 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Lin9Q8C735 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lin9Q8C735 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lin9Q8C735 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lin9Q8C735 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.57■■■□□ 2
Lin9Q8C735 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lin9Q8C735 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Lin9Q8C735 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.53■■■□□ 2
Lin9Q8C735 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.52■■■□□ 2
Lin9Q8C735 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Lin9Q8C735 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.51■■□□□ 1.99
Lin9Q8C735 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Lin9Q8C735 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.5■■□□□ 1.99
Lin9Q8C735 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.5■■□□□ 1.99
Lin9Q8C735 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lin9Q8C735 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lin9Q8C735 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Lin9Q8C735 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Lin9Q8C735 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lin9Q8C735 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.47■■□□□ 1.99
Lin9Q8C735 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lin9Q8C735 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Lin9Q8C735 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Lin9Q8C735 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.45■■□□□ 1.98
Lin9Q8C735 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Lin9Q8C735 Gm45855-201ENSMUST00000212546 880 ntBASIC27.44■■□□□ 1.98
Lin9Q8C735 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Lin9Q8C735 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Lin9Q8C735 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Lin9Q8C735 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Lin9Q8C735 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.43■■□□□ 1.98
Lin9Q8C735 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Lin9Q8C735 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Lin9Q8C735 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
Lin9Q8C735 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Lin9Q8C735 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Lin9Q8C735 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.38■■□□□ 1.97
Lin9Q8C735 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lin9Q8C735 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Lin9Q8C735 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.35■■□□□ 1.97
Lin9Q8C735 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Lin9Q8C735 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Lin9Q8C735 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Lin9Q8C735 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Lin9Q8C735 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lin9Q8C735 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lin9Q8C735 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lin9Q8C735 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lin9Q8C735 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.3■■□□□ 1.96
Lin9Q8C735 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Lin9Q8C735 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Lin9Q8C735 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Lin9Q8C735 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Lin9Q8C735 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lin9Q8C735 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Lin9Q8C735 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lin9Q8C735 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lin9Q8C735 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lin9Q8C735 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.24■■□□□ 1.95
Lin9Q8C735 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Lin9Q8C735 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Lin9Q8C735 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lin9Q8C735 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lin9Q8C735 Gm9397-201ENSMUST00000200125 605 ntBASIC27.21■■□□□ 1.95
Lin9Q8C735 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Lin9Q8C735 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Lin9Q8C735 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lin9Q8C735 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
Lin9Q8C735 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Lin9Q8C735 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.17■■□□□ 1.94
Lin9Q8C735 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Lin9Q8C735 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Lin9Q8C735 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Lin9Q8C735 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Lin9Q8C735 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.16■■□□□ 1.94
Lin9Q8C735 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Lin9Q8C735 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.16■■□□□ 1.94
Lin9Q8C735 Zxda-201ENSMUST00000117281 2621 ntBASIC27.15■■□□□ 1.94
Lin9Q8C735 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.15■■□□□ 1.94
Lin9Q8C735 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Lin9Q8C735 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Lin9Q8C735 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.14■■□□□ 1.94
Lin9Q8C735 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lin9Q8C735 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Lin9Q8C735 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lin9Q8C735 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Lin9Q8C735 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lin9Q8C735 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lin9Q8C735 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Lin9Q8C735 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
Lin9Q8C735 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.07■■□□□ 1.92
Lin9Q8C735 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Lin9Q8C735 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Lin9Q8C735 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Lin9Q8C735 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Lin9Q8C735 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms