Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm11541Q8C4D8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.59■■□□□ 1.21
Gm11541Q8C4D8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm11541Q8C4D8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Gm11541Q8C4D8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm11541Q8C4D8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm11541Q8C4D8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Gm11541Q8C4D8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm11541Q8C4D8 Gm16148-201ENSMUST00000119653 893 ntBASIC22.55■■□□□ 1.2
Gm11541Q8C4D8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm11541Q8C4D8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm11541Q8C4D8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm11541Q8C4D8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm11541Q8C4D8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Gm11541Q8C4D8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm11541Q8C4D8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm11541Q8C4D8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm11541Q8C4D8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.49■■□□□ 1.19
Gm11541Q8C4D8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm11541Q8C4D8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm11541Q8C4D8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm11541Q8C4D8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm11541Q8C4D8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
Gm11541Q8C4D8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm11541Q8C4D8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm11541Q8C4D8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11541Q8C4D8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Gm11541Q8C4D8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Gm11541Q8C4D8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11541Q8C4D8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Gm11541Q8C4D8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm11541Q8C4D8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm11541Q8C4D8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.44■■□□□ 1.18
Gm11541Q8C4D8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm11541Q8C4D8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Gm11541Q8C4D8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm11541Q8C4D8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Gm11541Q8C4D8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Gm11541Q8C4D8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm11541Q8C4D8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm11541Q8C4D8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm11541Q8C4D8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
Gm11541Q8C4D8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm11541Q8C4D8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Gm11541Q8C4D8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm11541Q8C4D8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Gm11541Q8C4D8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm11541Q8C4D8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm11541Q8C4D8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm11541Q8C4D8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm11541Q8C4D8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.35■■□□□ 1.17
Gm11541Q8C4D8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11541Q8C4D8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11541Q8C4D8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Gm11541Q8C4D8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11541Q8C4D8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm11541Q8C4D8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm11541Q8C4D8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Gm11541Q8C4D8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm11541Q8C4D8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.32■■□□□ 1.16
Gm11541Q8C4D8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm11541Q8C4D8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm11541Q8C4D8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm11541Q8C4D8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11541Q8C4D8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm11541Q8C4D8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm11541Q8C4D8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Gm11541Q8C4D8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Gm11541Q8C4D8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11541Q8C4D8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm11541Q8C4D8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm11541Q8C4D8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm11541Q8C4D8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Gm11541Q8C4D8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.26■■□□□ 1.15
Gm11541Q8C4D8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Gm11541Q8C4D8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11541Q8C4D8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11541Q8C4D8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11541Q8C4D8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11541Q8C4D8 Zfp131-205ENSMUST00000223812 663 ntBASIC22.23■■□□□ 1.15
Gm11541Q8C4D8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11541Q8C4D8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11541Q8C4D8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm11541Q8C4D8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Gm11541Q8C4D8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11541Q8C4D8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11541Q8C4D8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Gm11541Q8C4D8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11541Q8C4D8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.2■■□□□ 1.14
Gm11541Q8C4D8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Gm11541Q8C4D8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.18■■□□□ 1.14
Gm11541Q8C4D8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Gm11541Q8C4D8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm11541Q8C4D8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Gm11541Q8C4D8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Gm11541Q8C4D8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm11541Q8C4D8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm11541Q8C4D8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gm11541Q8C4D8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm11541Q8C4D8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms