Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Lcmt2Q8BYR1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lcmt2Q8BYR1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Lcmt2Q8BYR1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Lcmt2Q8BYR1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lcmt2Q8BYR1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lcmt2Q8BYR1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lcmt2Q8BYR1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Lcmt2Q8BYR1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lcmt2Q8BYR1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lcmt2Q8BYR1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lcmt2Q8BYR1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lcmt2Q8BYR1 Gm24804-201ENSMUST00000174982 85 ntBASIC23.45■■□□□ 1.34
Lcmt2Q8BYR1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.44■■□□□ 1.34
Lcmt2Q8BYR1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lcmt2Q8BYR1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lcmt2Q8BYR1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lcmt2Q8BYR1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Lcmt2Q8BYR1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Lcmt2Q8BYR1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lcmt2Q8BYR1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.39■■□□□ 1.34
Lcmt2Q8BYR1 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.38■■□□□ 1.33
Lcmt2Q8BYR1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Lcmt2Q8BYR1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lcmt2Q8BYR1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
Lcmt2Q8BYR1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lcmt2Q8BYR1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lcmt2Q8BYR1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Lcmt2Q8BYR1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
Lcmt2Q8BYR1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lcmt2Q8BYR1 Peli2-204ENSMUST00000226513 1320 ntBASIC23.34■■□□□ 1.33
Lcmt2Q8BYR1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.34■■□□□ 1.33
Lcmt2Q8BYR1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Lcmt2Q8BYR1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Lcmt2Q8BYR1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Lcmt2Q8BYR1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lcmt2Q8BYR1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lcmt2Q8BYR1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lcmt2Q8BYR1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Lcmt2Q8BYR1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lcmt2Q8BYR1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lcmt2Q8BYR1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lcmt2Q8BYR1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.29■■□□□ 1.32
Lcmt2Q8BYR1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lcmt2Q8BYR1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lcmt2Q8BYR1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Lcmt2Q8BYR1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Lcmt2Q8BYR1 Amer2-203ENSMUST00000225247 2662 ntBASIC23.27■■□□□ 1.32
Lcmt2Q8BYR1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Lcmt2Q8BYR1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.26■■□□□ 1.31
Lcmt2Q8BYR1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lcmt2Q8BYR1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lcmt2Q8BYR1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Lcmt2Q8BYR1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lcmt2Q8BYR1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lcmt2Q8BYR1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.24■■□□□ 1.31
Lcmt2Q8BYR1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lcmt2Q8BYR1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lcmt2Q8BYR1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lcmt2Q8BYR1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lcmt2Q8BYR1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lcmt2Q8BYR1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lcmt2Q8BYR1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lcmt2Q8BYR1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lcmt2Q8BYR1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.19■■□□□ 1.3
Lcmt2Q8BYR1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lcmt2Q8BYR1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Lcmt2Q8BYR1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lcmt2Q8BYR1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lcmt2Q8BYR1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lcmt2Q8BYR1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.16■■□□□ 1.3
Lcmt2Q8BYR1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lcmt2Q8BYR1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.16■■□□□ 1.3
Lcmt2Q8BYR1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Lcmt2Q8BYR1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lcmt2Q8BYR1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lcmt2Q8BYR1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Lcmt2Q8BYR1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lcmt2Q8BYR1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lcmt2Q8BYR1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.12■■□□□ 1.29
Lcmt2Q8BYR1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lcmt2Q8BYR1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lcmt2Q8BYR1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lcmt2Q8BYR1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Lcmt2Q8BYR1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lcmt2Q8BYR1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lcmt2Q8BYR1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Lcmt2Q8BYR1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lcmt2Q8BYR1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lcmt2Q8BYR1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lcmt2Q8BYR1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
Lcmt2Q8BYR1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lcmt2Q8BYR1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Lcmt2Q8BYR1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Lcmt2Q8BYR1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lcmt2Q8BYR1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Lcmt2Q8BYR1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lcmt2Q8BYR1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lcmt2Q8BYR1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Lcmt2Q8BYR1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms