Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hmbox1Q8BJA3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmbox1Q8BJA3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Hmbox1Q8BJA3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Hmbox1Q8BJA3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.56■■□□□ 1.52
Hmbox1Q8BJA3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Hmbox1Q8BJA3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmbox1Q8BJA3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.48■■□□□ 1.51
Hmbox1Q8BJA3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hmbox1Q8BJA3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmbox1Q8BJA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Hmbox1Q8BJA3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hmbox1Q8BJA3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hmbox1Q8BJA3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.37■■□□□ 1.49
Hmbox1Q8BJA3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.37■■□□□ 1.49
Hmbox1Q8BJA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.35■■□□□ 1.49
Hmbox1Q8BJA3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Hmbox1Q8BJA3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hmbox1Q8BJA3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Hmbox1Q8BJA3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmbox1Q8BJA3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmbox1Q8BJA3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hmbox1Q8BJA3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hmbox1Q8BJA3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Hmbox1Q8BJA3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.22■■□□□ 1.47
Hmbox1Q8BJA3 Mipep-204ENSMUST00000225043 1548 ntBASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Gm24970-201ENSMUST00000175582 82 ntBASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Hmbox1Q8BJA3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Hmbox1Q8BJA3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hmbox1Q8BJA3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.17■■□□□ 1.46
Hmbox1Q8BJA3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hmbox1Q8BJA3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Hmbox1Q8BJA3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Hmbox1Q8BJA3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hmbox1Q8BJA3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.13■■□□□ 1.45
Hmbox1Q8BJA3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmbox1Q8BJA3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmbox1Q8BJA3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hmbox1Q8BJA3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Hmbox1Q8BJA3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmbox1Q8BJA3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Zxda-201ENSMUST00000117281 2621 ntBASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmbox1Q8BJA3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.04■■□□□ 1.44
Hmbox1Q8BJA3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Hmbox1Q8BJA3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms