Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26,62■■□□□ 1,85
Trim6Q8BGE7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Trim6Q8BGE7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Trim6Q8BGE7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Trim6Q8BGE7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Trim6Q8BGE7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,58■■□□□ 1,85
Trim6Q8BGE7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Trim6Q8BGE7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26,56■■□□□ 1,84
Trim6Q8BGE7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26,55■■□□□ 1,84
Trim6Q8BGE7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Trim6Q8BGE7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26,55■■□□□ 1,84
Trim6Q8BGE7 AC166822.3-201ENSMUST00000227394 661 ntBASIC26,55■■□□□ 1,84
Trim6Q8BGE7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26,55■■□□□ 1,84
Trim6Q8BGE7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Trim6Q8BGE7 Amer2-203ENSMUST00000225247 2662 ntBASIC26,52■■□□□ 1,84
Trim6Q8BGE7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Trim6Q8BGE7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Trim6Q8BGE7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,51■■□□□ 1,83
Trim6Q8BGE7 Gm27322-201ENSMUST00000184007 104 ntBASIC26,51■■□□□ 1,83
Trim6Q8BGE7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26,5■■□□□ 1,83
Trim6Q8BGE7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,5■■□□□ 1,83
Trim6Q8BGE7 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,5■■□□□ 1,83
Trim6Q8BGE7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Trim6Q8BGE7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26,48■■□□□ 1,83
Trim6Q8BGE7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Trim6Q8BGE7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,46■■□□□ 1,83
Trim6Q8BGE7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26,45■■□□□ 1,82
Trim6Q8BGE7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Trim6Q8BGE7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Trim6Q8BGE7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Trim6Q8BGE7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26,4■■□□□ 1,82
Trim6Q8BGE7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26,4■■□□□ 1,82
Trim6Q8BGE7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Trim6Q8BGE7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26,39■■□□□ 1,81
Trim6Q8BGE7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26,39■■□□□ 1,81
Trim6Q8BGE7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Trim6Q8BGE7 Fezf2-202ENSMUST00000224023 1917 ntBASIC26,38■■□□□ 1,81
Trim6Q8BGE7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26,38■■□□□ 1,81
Trim6Q8BGE7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26,38■■□□□ 1,81
Trim6Q8BGE7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Trim6Q8BGE7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26,37■■□□□ 1,81
Trim6Q8BGE7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,37■■□□□ 1,81
Trim6Q8BGE7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Trim6Q8BGE7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26,36■■□□□ 1,81
Trim6Q8BGE7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26,36■■□□□ 1,81
Trim6Q8BGE7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Trim6Q8BGE7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Trim6Q8BGE7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26,35■■□□□ 1,81
Trim6Q8BGE7 Gm6345-201ENSMUST00000180378 1691 ntBASIC26,35■■□□□ 1,81
Trim6Q8BGE7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26,35■■□□□ 1,81
Trim6Q8BGE7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26,31■■□□□ 1,8
Trim6Q8BGE7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26,3■■□□□ 1,8
Trim6Q8BGE7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Trim6Q8BGE7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26,29■■□□□ 1,8
Trim6Q8BGE7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26,29■■□□□ 1,8
Trim6Q8BGE7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26,28■■□□□ 1,8
Trim6Q8BGE7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Trim6Q8BGE7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26,27■■□□□ 1,8
Trim6Q8BGE7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Trim6Q8BGE7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26,27■■□□□ 1,8
Trim6Q8BGE7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26,26■■□□□ 1,79
Trim6Q8BGE7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26,26■■□□□ 1,79
Trim6Q8BGE7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Trim6Q8BGE7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Trim6Q8BGE7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26,25■■□□□ 1,79
Trim6Q8BGE7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Trim6Q8BGE7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,25■■□□□ 1,79
Trim6Q8BGE7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Trim6Q8BGE7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26,24■■□□□ 1,79
Trim6Q8BGE7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26,24■■□□□ 1,79
Trim6Q8BGE7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26,23■■□□□ 1,79
Trim6Q8BGE7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26,23■■□□□ 1,79
Trim6Q8BGE7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26,22■■□□□ 1,79
Trim6Q8BGE7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26,22■■□□□ 1,79
Trim6Q8BGE7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26,22■■□□□ 1,79
Trim6Q8BGE7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26,2■■□□□ 1,79
Trim6Q8BGE7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26,19■■□□□ 1,78
Trim6Q8BGE7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Trim6Q8BGE7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
Trim6Q8BGE7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Trim6Q8BGE7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26,16■■□□□ 1,78
Trim6Q8BGE7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Trim6Q8BGE7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26,14■■□□□ 1,78
Trim6Q8BGE7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,78
Trim6Q8BGE7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26,14■■□□□ 1,78
Trim6Q8BGE7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26,14■■□□□ 1,78
Trim6Q8BGE7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,77
Trim6Q8BGE7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26,13■■□□□ 1,77
Trim6Q8BGE7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Trim6Q8BGE7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26,12■■□□□ 1,77
Trim6Q8BGE7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26,12■■□□□ 1,77
Trim6Q8BGE7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Trim6Q8BGE7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Trim6Q8BGE7 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,09■■□□□ 1,77
Trim6Q8BGE7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26,09■■□□□ 1,77
Trim6Q8BGE7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26,07■■□□□ 1,76
Trim6Q8BGE7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Trim6Q8BGE7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Trim6Q8BGE7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26,07■■□□□ 1,76
Trim6Q8BGE7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26,07■■□□□ 1,76
Retrieved 100 of 76,532 protein–RNA pairs in 32,6 ms