Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Prdm4Q80V63 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
Prdm4Q80V63 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Prdm4Q80V63 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Prdm4Q80V63 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Prdm4Q80V63 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Prdm4Q80V63 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Prdm4Q80V63 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Prdm4Q80V63 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Prdm4Q80V63 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Prdm4Q80V63 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Prdm4Q80V63 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26■■□□□ 1.75
Prdm4Q80V63 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26■■□□□ 1.75
Prdm4Q80V63 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26■■□□□ 1.75
Prdm4Q80V63 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Prdm4Q80V63 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Prdm4Q80V63 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Prdm4Q80V63 Gm8109-201ENSMUST00000194076 746 ntBASIC25.98■■□□□ 1.75
Prdm4Q80V63 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Prdm4Q80V63 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.98■■□□□ 1.75
Prdm4Q80V63 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Prdm4Q80V63 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Prdm4Q80V63 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.97■■□□□ 1.75
Prdm4Q80V63 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Prdm4Q80V63 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Prdm4Q80V63 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Prdm4Q80V63 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Prdm4Q80V63 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Prdm4Q80V63 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Prdm4Q80V63 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Prdm4Q80V63 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Prdm4Q80V63 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Prdm4Q80V63 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Prdm4Q80V63 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Prdm4Q80V63 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prdm4Q80V63 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prdm4Q80V63 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prdm4Q80V63 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Prdm4Q80V63 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prdm4Q80V63 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Prdm4Q80V63 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Prdm4Q80V63 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prdm4Q80V63 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Prdm4Q80V63 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Prdm4Q80V63 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Prdm4Q80V63 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Prdm4Q80V63 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prdm4Q80V63 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
Prdm4Q80V63 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prdm4Q80V63 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prdm4Q80V63 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Prdm4Q80V63 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Prdm4Q80V63 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Prdm4Q80V63 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Prdm4Q80V63 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Prdm4Q80V63 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Prdm4Q80V63 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Prdm4Q80V63 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.75■■□□□ 1.71
Prdm4Q80V63 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prdm4Q80V63 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Prdm4Q80V63 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.74■■□□□ 1.71
Prdm4Q80V63 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prdm4Q80V63 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Prdm4Q80V63 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
Prdm4Q80V63 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prdm4Q80V63 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Prdm4Q80V63 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prdm4Q80V63 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Prdm4Q80V63 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Prdm4Q80V63 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prdm4Q80V63 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Prdm4Q80V63 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prdm4Q80V63 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.66■■□□□ 1.7
Prdm4Q80V63 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Prdm4Q80V63 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Prdm4Q80V63 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Prdm4Q80V63 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Prdm4Q80V63 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Prdm4Q80V63 Gm27322-201ENSMUST00000184007 104 ntBASIC25.64■■□□□ 1.7
Prdm4Q80V63 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prdm4Q80V63 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prdm4Q80V63 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Prdm4Q80V63 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prdm4Q80V63 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.59■■□□□ 1.69
Prdm4Q80V63 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prdm4Q80V63 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Prdm4Q80V63 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Prdm4Q80V63 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Prdm4Q80V63 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Prdm4Q80V63 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prdm4Q80V63 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prdm4Q80V63 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prdm4Q80V63 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.56■■□□□ 1.68
Prdm4Q80V63 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Prdm4Q80V63 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prdm4Q80V63 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Prdm4Q80V63 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Prdm4Q80V63 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Prdm4Q80V63 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Prdm4Q80V63 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms