Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ush1gQ80T11 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ush1gQ80T11 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.06■■■□□ 2.08
Ush1gQ80T11 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ush1gQ80T11 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ush1gQ80T11 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ush1gQ80T11 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ush1gQ80T11 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
Ush1gQ80T11 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ush1gQ80T11 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.02■■■□□ 2.08
Ush1gQ80T11 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Ush1gQ80T11 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28■■■□□ 2.07
Ush1gQ80T11 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28■■■□□ 2.07
Ush1gQ80T11 Gm24970-201ENSMUST00000175582 82 ntBASIC28■■■□□ 2.07
Ush1gQ80T11 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Ush1gQ80T11 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Ush1gQ80T11 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ush1gQ80T11 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
Ush1gQ80T11 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ush1gQ80T11 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ush1gQ80T11 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.94■■■□□ 2.06
Ush1gQ80T11 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ush1gQ80T11 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ush1gQ80T11 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ush1gQ80T11 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.92■■■□□ 2.06
Ush1gQ80T11 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ush1gQ80T11 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.9■■■□□ 2.06
Ush1gQ80T11 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.89■■■□□ 2.06
Ush1gQ80T11 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ush1gQ80T11 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Ush1gQ80T11 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ush1gQ80T11 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ush1gQ80T11 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.86■■■□□ 2.05
Ush1gQ80T11 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ush1gQ80T11 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ush1gQ80T11 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ush1gQ80T11 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ush1gQ80T11 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.78■■■□□ 2.04
Ush1gQ80T11 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ush1gQ80T11 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ush1gQ80T11 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.77■■■□□ 2.04
Ush1gQ80T11 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ush1gQ80T11 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Ush1gQ80T11 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
Ush1gQ80T11 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ush1gQ80T11 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.73■■■□□ 2.03
Ush1gQ80T11 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ush1gQ80T11 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.72■■■□□ 2.03
Ush1gQ80T11 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ush1gQ80T11 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.02
Ush1gQ80T11 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Ush1gQ80T11 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.69■■■□□ 2.02
Ush1gQ80T11 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ush1gQ80T11 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ush1gQ80T11 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.67■■■□□ 2.02
Ush1gQ80T11 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Ush1gQ80T11 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ush1gQ80T11 Gm8503-201ENSMUST00000118131 455 ntBASIC27.64■■■□□ 2.02
Ush1gQ80T11 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
Ush1gQ80T11 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ush1gQ80T11 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ush1gQ80T11 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Ush1gQ80T11 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.62■■■□□ 2.01
Ush1gQ80T11 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Ush1gQ80T11 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ush1gQ80T11 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ush1gQ80T11 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Ush1gQ80T11 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Ush1gQ80T11 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ush1gQ80T11 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ush1gQ80T11 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.57■■■□□ 2
Ush1gQ80T11 Gm6821-201ENSMUST00000107540 542 ntBASIC27.56■■■□□ 2
Ush1gQ80T11 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.56■■■□□ 2
Ush1gQ80T11 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.55■■■□□ 2
Ush1gQ80T11 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ush1gQ80T11 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.55■■■□□ 2
Ush1gQ80T11 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ush1gQ80T11 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ush1gQ80T11 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ush1gQ80T11 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ush1gQ80T11 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ush1gQ80T11 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ush1gQ80T11 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ush1gQ80T11 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Ush1gQ80T11 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ush1gQ80T11 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.46■■□□□ 1.99
Ush1gQ80T11 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.45■■□□□ 1.98
Ush1gQ80T11 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Ush1gQ80T11 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ush1gQ80T11 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ush1gQ80T11 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ush1gQ80T11 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ush1gQ80T11 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ush1gQ80T11 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
Ush1gQ80T11 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Ush1gQ80T11 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ush1gQ80T11 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ush1gQ80T11 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ush1gQ80T11 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ush1gQ80T11 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms