Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
2210407C18RikQ6YI28 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.4■■□□□ 1.18
2210407C18RikQ6YI28 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
2210407C18RikQ6YI28 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
2210407C18RikQ6YI28 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
2210407C18RikQ6YI28 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.39■■□□□ 1.17
2210407C18RikQ6YI28 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
2210407C18RikQ6YI28 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
2210407C18RikQ6YI28 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
2210407C18RikQ6YI28 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
2210407C18RikQ6YI28 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
2210407C18RikQ6YI28 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
2210407C18RikQ6YI28 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
2210407C18RikQ6YI28 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
2210407C18RikQ6YI28 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
2210407C18RikQ6YI28 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
2210407C18RikQ6YI28 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
2210407C18RikQ6YI28 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.33■■□□□ 1.17
2210407C18RikQ6YI28 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
2210407C18RikQ6YI28 Peli2-204ENSMUST00000226513 1320 ntBASIC22.32■■□□□ 1.16
2210407C18RikQ6YI28 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.32■■□□□ 1.16
2210407C18RikQ6YI28 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
2210407C18RikQ6YI28 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.3■■□□□ 1.16
2210407C18RikQ6YI28 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
2210407C18RikQ6YI28 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
2210407C18RikQ6YI28 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
2210407C18RikQ6YI28 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
2210407C18RikQ6YI28 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
2210407C18RikQ6YI28 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
2210407C18RikQ6YI28 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
2210407C18RikQ6YI28 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
2210407C18RikQ6YI28 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
2210407C18RikQ6YI28 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
2210407C18RikQ6YI28 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
2210407C18RikQ6YI28 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
2210407C18RikQ6YI28 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
2210407C18RikQ6YI28 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
2210407C18RikQ6YI28 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.21■■□□□ 1.15
2210407C18RikQ6YI28 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
2210407C18RikQ6YI28 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
2210407C18RikQ6YI28 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
2210407C18RikQ6YI28 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.19■■□□□ 1.14
2210407C18RikQ6YI28 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
2210407C18RikQ6YI28 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
2210407C18RikQ6YI28 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
2210407C18RikQ6YI28 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
2210407C18RikQ6YI28 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
2210407C18RikQ6YI28 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
2210407C18RikQ6YI28 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
2210407C18RikQ6YI28 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
2210407C18RikQ6YI28 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
2210407C18RikQ6YI28 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
2210407C18RikQ6YI28 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
2210407C18RikQ6YI28 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
2210407C18RikQ6YI28 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
2210407C18RikQ6YI28 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
2210407C18RikQ6YI28 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
2210407C18RikQ6YI28 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
2210407C18RikQ6YI28 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
2210407C18RikQ6YI28 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
2210407C18RikQ6YI28 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.1■■□□□ 1.13
2210407C18RikQ6YI28 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
2210407C18RikQ6YI28 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
2210407C18RikQ6YI28 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
2210407C18RikQ6YI28 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
2210407C18RikQ6YI28 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
2210407C18RikQ6YI28 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
2210407C18RikQ6YI28 Gm16148-201ENSMUST00000119653 893 ntBASIC22.07■■□□□ 1.12
2210407C18RikQ6YI28 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
2210407C18RikQ6YI28 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
2210407C18RikQ6YI28 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
2210407C18RikQ6YI28 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
2210407C18RikQ6YI28 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.05■■□□□ 1.12
2210407C18RikQ6YI28 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
2210407C18RikQ6YI28 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
2210407C18RikQ6YI28 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
2210407C18RikQ6YI28 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
2210407C18RikQ6YI28 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.02■■□□□ 1.12
2210407C18RikQ6YI28 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
2210407C18RikQ6YI28 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
2210407C18RikQ6YI28 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
2210407C18RikQ6YI28 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.97■■□□□ 1.11
2210407C18RikQ6YI28 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
2210407C18RikQ6YI28 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.96■■□□□ 1.11
2210407C18RikQ6YI28 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
2210407C18RikQ6YI28 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.96■■□□□ 1.11
2210407C18RikQ6YI28 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
2210407C18RikQ6YI28 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
2210407C18RikQ6YI28 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
2210407C18RikQ6YI28 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
2210407C18RikQ6YI28 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
2210407C18RikQ6YI28 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
2210407C18RikQ6YI28 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Zfp131-205ENSMUST00000223812 663 ntBASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
2210407C18RikQ6YI28 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
2210407C18RikQ6YI28 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms