Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Ptch1Q61115 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Ptch1Q61115 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
Ptch1Q61115 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Ptch1Q61115 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
Ptch1Q61115 Gm43863-201ENSMUST00000203822 1192 ntBASIC38.63■■■■□ 3.78
Ptch1Q61115 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC38.6■■■■□ 3.77
Ptch1Q61115 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
Ptch1Q61115 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC38.56■■■■□ 3.76
Ptch1Q61115 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC38.56■■■■□ 3.76
Ptch1Q61115 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Ptch1Q61115 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Ptch1Q61115 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC38.52■■■■□ 3.76
Ptch1Q61115 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC38.5■■■■□ 3.75
Ptch1Q61115 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
Ptch1Q61115 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
Ptch1Q61115 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC38.47■■■■□ 3.75
Ptch1Q61115 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC38.47■■■■□ 3.75
Ptch1Q61115 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Ptch1Q61115 Gm42809-201ENSMUST00000198429 1138 ntBASIC38.44■■■■□ 3.74
Ptch1Q61115 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC38.43■■■■□ 3.74
Ptch1Q61115 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Ptch1Q61115 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Ptch1Q61115 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC38.39■■■■□ 3.74
Ptch1Q61115 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC38.38■■■■□ 3.73
Ptch1Q61115 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC38.36■■■■□ 3.73
Ptch1Q61115 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Ptch1Q61115 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC38.33■■■■□ 3.73
Ptch1Q61115 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Ptch1Q61115 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
Ptch1Q61115 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Ptch1Q61115 AC157572.2-201ENSMUST00000226970 908 ntBASIC38.3■■■■□ 3.72
Ptch1Q61115 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC38.3■■■■□ 3.72
Ptch1Q61115 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC38.27■■■■□ 3.72
Ptch1Q61115 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC38.26■■■■□ 3.72
Ptch1Q61115 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Ptch1Q61115 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Ptch1Q61115 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Ptch1Q61115 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
Ptch1Q61115 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Ptch1Q61115 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC38.2■■■■□ 3.71
Ptch1Q61115 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC38.19■■■■□ 3.7
Ptch1Q61115 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Ptch1Q61115 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC38.18■■■■□ 3.7
Ptch1Q61115 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
Ptch1Q61115 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC38.16■■■■□ 3.7
Ptch1Q61115 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC38.16■■■■□ 3.7
Ptch1Q61115 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Ptch1Q61115 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
Ptch1Q61115 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Ptch1Q61115 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Ptch1Q61115 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC38.09■■■■□ 3.69
Ptch1Q61115 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC38.09■■■■□ 3.69
Ptch1Q61115 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC38.09■■■■□ 3.69
Ptch1Q61115 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Ptch1Q61115 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Ptch1Q61115 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC38.07■■■■□ 3.68
Ptch1Q61115 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
Ptch1Q61115 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
Ptch1Q61115 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC38.05■■■■□ 3.68
Ptch1Q61115 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Ptch1Q61115 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC38.01■■■■□ 3.68
Ptch1Q61115 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Ptch1Q61115 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Ptch1Q61115 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
Ptch1Q61115 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Ptch1Q61115 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Ptch1Q61115 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC37.97■■■■□ 3.67
Ptch1Q61115 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37.97■■■■□ 3.67
Ptch1Q61115 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC37.97■■■■□ 3.67
Ptch1Q61115 Nkain2-201ENSMUST00000092602 558 ntBASIC37.95■■■■□ 3.67
Ptch1Q61115 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC37.93■■■■□ 3.66
Ptch1Q61115 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC37.9■■■■□ 3.66
Ptch1Q61115 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC37.9■■■■□ 3.66
Ptch1Q61115 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC37.89■■■■□ 3.66
Ptch1Q61115 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC37.87■■■■□ 3.65
Ptch1Q61115 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Ptch1Q61115 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37.87■■■■□ 3.65
Ptch1Q61115 Gm7432-201ENSMUST00000210343 879 ntBASIC37.87■■■■□ 3.65
Ptch1Q61115 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC37.87■■■■□ 3.65
Ptch1Q61115 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Ptch1Q61115 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Ptch1Q61115 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37.83■■■■□ 3.65
Ptch1Q61115 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
Ptch1Q61115 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC37.82■■■■□ 3.64
Ptch1Q61115 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Ptch1Q61115 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Ptch1Q61115 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
Ptch1Q61115 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Ptch1Q61115 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC37.79■■■■□ 3.64
Ptch1Q61115 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37.78■■■■□ 3.64
Ptch1Q61115 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC37.78■■■■□ 3.64
Ptch1Q61115 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Ptch1Q61115 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Ptch1Q61115 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC37.71■■■■□ 3.63
Ptch1Q61115 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC37.71■■■■□ 3.63
Ptch1Q61115 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
Ptch1Q61115 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC37.7■■■■□ 3.63
Ptch1Q61115 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Ptch1Q61115 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms