Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxf1Q61080 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxf1Q61080 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Foxf1Q61080 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Foxf1Q61080 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxf1Q61080 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
Foxf1Q61080 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxf1Q61080 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
Foxf1Q61080 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Foxf1Q61080 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxf1Q61080 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Foxf1Q61080 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Foxf1Q61080 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxf1Q61080 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Foxf1Q61080 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Foxf1Q61080 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Foxf1Q61080 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.14■□□□□ 0.98
Foxf1Q61080 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Foxf1Q61080 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxf1Q61080 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Foxf1Q61080 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Foxf1Q61080 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Foxf1Q61080 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxf1Q61080 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxf1Q61080 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxf1Q61080 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxf1Q61080 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Foxf1Q61080 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxf1Q61080 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Foxf1Q61080 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Foxf1Q61080 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxf1Q61080 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Foxf1Q61080 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Foxf1Q61080 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxf1Q61080 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.06■□□□□ 0.96
Foxf1Q61080 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxf1Q61080 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.06■□□□□ 0.96
Foxf1Q61080 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxf1Q61080 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxf1Q61080 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Foxf1Q61080 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Foxf1Q61080 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.05■□□□□ 0.96
Foxf1Q61080 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Foxf1Q61080 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.05■□□□□ 0.96
Foxf1Q61080 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.05■□□□□ 0.96
Foxf1Q61080 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Foxf1Q61080 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Foxf1Q61080 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Foxf1Q61080 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Foxf1Q61080 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxf1Q61080 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Foxf1Q61080 Gm16148-201ENSMUST00000119653 893 ntBASIC21.02■□□□□ 0.96
Foxf1Q61080 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Foxf1Q61080 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Foxf1Q61080 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21■□□□□ 0.95
Foxf1Q61080 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Foxf1Q61080 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxf1Q61080 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.99■□□□□ 0.95
Foxf1Q61080 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxf1Q61080 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxf1Q61080 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxf1Q61080 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxf1Q61080 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxf1Q61080 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxf1Q61080 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxf1Q61080 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxf1Q61080 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Foxf1Q61080 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxf1Q61080 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Foxf1Q61080 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxf1Q61080 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Foxf1Q61080 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Foxf1Q61080 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Foxf1Q61080 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Foxf1Q61080 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Foxf1Q61080 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Foxf1Q61080 Amer2-203ENSMUST00000225247 2662 ntBASIC20.89■□□□□ 0.93
Foxf1Q61080 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Foxf1Q61080 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Foxf1Q61080 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Foxf1Q61080 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxf1Q61080 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Foxf1Q61080 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.86■□□□□ 0.93
Foxf1Q61080 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Foxf1Q61080 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Foxf1Q61080 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Foxf1Q61080 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Foxf1Q61080 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Foxf1Q61080 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Foxf1Q61080 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Foxf1Q61080 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxf1Q61080 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Foxf1Q61080 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Foxf1Q61080 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Foxf1Q61080 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Foxf1Q61080 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Foxf1Q61080 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Foxf1Q61080 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.79■□□□□ 0.92
Foxf1Q61080 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Foxf1Q61080 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms