Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lama5Q61001 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
Lama5Q61001 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lama5Q61001 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lama5Q61001 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Lama5Q61001 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lama5Q61001 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lama5Q61001 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Lama5Q61001 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Lama5Q61001 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.79■■□□□ 1.24
Lama5Q61001 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.78■■□□□ 1.24
Lama5Q61001 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.78■■□□□ 1.24
Lama5Q61001 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.23
Lama5Q61001 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.75■■□□□ 1.23
Lama5Q61001 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.75■■□□□ 1.23
Lama5Q61001 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.75■■□□□ 1.23
Lama5Q61001 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.74■■□□□ 1.23
Lama5Q61001 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lama5Q61001 Mir6538-201ENSMUST00000183713 110 ntBASIC22.74■■□□□ 1.23
Lama5Q61001 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lama5Q61001 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lama5Q61001 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lama5Q61001 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Lama5Q61001 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Lama5Q61001 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Lama5Q61001 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Lama5Q61001 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.69■■□□□ 1.22
Lama5Q61001 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.68■■□□□ 1.22
Lama5Q61001 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.67■■□□□ 1.22
Lama5Q61001 Gm7432-201ENSMUST00000210343 879 ntBASIC22.67■■□□□ 1.22
Lama5Q61001 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
Lama5Q61001 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
Lama5Q61001 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.64■■□□□ 1.21
Lama5Q61001 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Lama5Q61001 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.63■■□□□ 1.21
Lama5Q61001 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lama5Q61001 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.63■■□□□ 1.21
Lama5Q61001 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lama5Q61001 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.62■■□□□ 1.21
Lama5Q61001 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lama5Q61001 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lama5Q61001 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lama5Q61001 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lama5Q61001 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lama5Q61001 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.6■■□□□ 1.21
Lama5Q61001 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lama5Q61001 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Lama5Q61001 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lama5Q61001 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Lama5Q61001 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lama5Q61001 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.56■■□□□ 1.2
Lama5Q61001 Gm11175-201ENSMUST00000116172 543 ntBASIC22.55■■□□□ 1.2
Lama5Q61001 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lama5Q61001 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
Lama5Q61001 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lama5Q61001 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lama5Q61001 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lama5Q61001 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lama5Q61001 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lama5Q61001 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lama5Q61001 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lama5Q61001 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lama5Q61001 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lama5Q61001 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.49■■□□□ 1.19
Lama5Q61001 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lama5Q61001 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lama5Q61001 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lama5Q61001 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lama5Q61001 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lama5Q61001 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lama5Q61001 Cap2-205ENSMUST00000225824 1634 ntBASIC22.45■■□□□ 1.18
Lama5Q61001 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Lama5Q61001 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lama5Q61001 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lama5Q61001 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lama5Q61001 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lama5Q61001 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lama5Q61001 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lama5Q61001 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lama5Q61001 Gm11599-201ENSMUST00000118720 878 ntBASIC22.41■■□□□ 1.18
Lama5Q61001 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Lama5Q61001 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Lama5Q61001 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Lama5Q61001 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Lama5Q61001 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lama5Q61001 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.39■■□□□ 1.17
Lama5Q61001 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
Lama5Q61001 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lama5Q61001 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lama5Q61001 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lama5Q61001 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.35■■□□□ 1.17
Lama5Q61001 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lama5Q61001 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lama5Q61001 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Lama5Q61001 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lama5Q61001 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lama5Q61001 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lama5Q61001 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Lama5Q61001 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.33■■□□□ 1.16
Lama5Q61001 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms