Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ripk1Q60855 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ripk1Q60855 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ripk1Q60855 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ripk1Q60855 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ripk1Q60855 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ripk1Q60855 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ripk1Q60855 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Ripk1Q60855 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ripk1Q60855 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ripk1Q60855 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ripk1Q60855 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ripk1Q60855 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ripk1Q60855 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ripk1Q60855 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ripk1Q60855 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.66■■□□□ 1.38
Ripk1Q60855 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ripk1Q60855 Zxda-201ENSMUST00000117281 2621 ntBASIC23.66■■□□□ 1.38
Ripk1Q60855 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Ripk1Q60855 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ripk1Q60855 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ripk1Q60855 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ripk1Q60855 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ripk1Q60855 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ripk1Q60855 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ripk1Q60855 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.62■■□□□ 1.37
Ripk1Q60855 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ripk1Q60855 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ripk1Q60855 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ripk1Q60855 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ripk1Q60855 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ripk1Q60855 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.6■■□□□ 1.37
Ripk1Q60855 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ripk1Q60855 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ripk1Q60855 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Ripk1Q60855 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.59■■□□□ 1.37
Ripk1Q60855 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Ripk1Q60855 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ripk1Q60855 Gm16148-201ENSMUST00000119653 893 ntBASIC23.57■■□□□ 1.36
Ripk1Q60855 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ripk1Q60855 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ripk1Q60855 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ripk1Q60855 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.55■■□□□ 1.36
Ripk1Q60855 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ripk1Q60855 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.54■■□□□ 1.36
Ripk1Q60855 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ripk1Q60855 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ripk1Q60855 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.52■■□□□ 1.36
Ripk1Q60855 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ripk1Q60855 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ripk1Q60855 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Ripk1Q60855 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ripk1Q60855 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ripk1Q60855 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ripk1Q60855 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ripk1Q60855 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ripk1Q60855 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ripk1Q60855 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ripk1Q60855 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ripk1Q60855 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ripk1Q60855 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.42■■□□□ 1.34
Ripk1Q60855 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ripk1Q60855 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ripk1Q60855 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ripk1Q60855 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ripk1Q60855 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Ripk1Q60855 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.39■■□□□ 1.33
Ripk1Q60855 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ripk1Q60855 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ripk1Q60855 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ripk1Q60855 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ripk1Q60855 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ripk1Q60855 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ripk1Q60855 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ripk1Q60855 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ripk1Q60855 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ripk1Q60855 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ripk1Q60855 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ripk1Q60855 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.33■■□□□ 1.33
Ripk1Q60855 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ripk1Q60855 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.32■■□□□ 1.32
Ripk1Q60855 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Ripk1Q60855 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ripk1Q60855 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ripk1Q60855 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ripk1Q60855 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ripk1Q60855 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ripk1Q60855 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Ripk1Q60855 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ripk1Q60855 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ripk1Q60855 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ripk1Q60855 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ripk1Q60855 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ripk1Q60855 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ripk1Q60855 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ripk1Q60855 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ripk1Q60855 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ripk1Q60855 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Ripk1Q60855 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ripk1Q60855 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms