Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7d-3Q5R1I1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7d-3Q5R1I1 Gm8109-201ENSMUST00000194076 746 ntBASIC18.33■□□□□ 0.52
Trav7d-3Q5R1I1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7d-3Q5R1I1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav7d-3Q5R1I1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Trav7d-3Q5R1I1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7d-3Q5R1I1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav7d-3Q5R1I1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7d-3Q5R1I1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav7d-3Q5R1I1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7d-3Q5R1I1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Trav7d-3Q5R1I1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7d-3Q5R1I1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav7d-3Q5R1I1 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.29■□□□□ 0.52
Trav7d-3Q5R1I1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7d-3Q5R1I1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7d-3Q5R1I1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7d-3Q5R1I1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7d-3Q5R1I1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Trav7d-3Q5R1I1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7d-3Q5R1I1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7d-3Q5R1I1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav7d-3Q5R1I1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7d-3Q5R1I1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7d-3Q5R1I1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trav7d-3Q5R1I1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7d-3Q5R1I1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7d-3Q5R1I1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7d-3Q5R1I1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.23■□□□□ 0.51
Trav7d-3Q5R1I1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav7d-3Q5R1I1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7d-3Q5R1I1 Peli2-204ENSMUST00000226513 1320 ntBASIC18.23■□□□□ 0.51
Trav7d-3Q5R1I1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav7d-3Q5R1I1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7d-3Q5R1I1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7d-3Q5R1I1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7d-3Q5R1I1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav7d-3Q5R1I1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7d-3Q5R1I1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav7d-3Q5R1I1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav7d-3Q5R1I1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7d-3Q5R1I1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7d-3Q5R1I1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7d-3Q5R1I1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7d-3Q5R1I1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7d-3Q5R1I1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7d-3Q5R1I1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7d-3Q5R1I1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7d-3Q5R1I1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav7d-3Q5R1I1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav7d-3Q5R1I1 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.14■□□□□ 0.49
Trav7d-3Q5R1I1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7d-3Q5R1I1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav7d-3Q5R1I1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7d-3Q5R1I1 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.13■□□□□ 0.49
Trav7d-3Q5R1I1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trav7d-3Q5R1I1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.13■□□□□ 0.49
Trav7d-3Q5R1I1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7d-3Q5R1I1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7d-3Q5R1I1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav7d-3Q5R1I1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7d-3Q5R1I1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav7d-3Q5R1I1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7d-3Q5R1I1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.11■□□□□ 0.49
Trav7d-3Q5R1I1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav7d-3Q5R1I1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7d-3Q5R1I1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav7d-3Q5R1I1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7d-3Q5R1I1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7d-3Q5R1I1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7d-3Q5R1I1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7d-3Q5R1I1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7d-3Q5R1I1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7d-3Q5R1I1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7d-3Q5R1I1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7d-3Q5R1I1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7d-3Q5R1I1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.06■□□□□ 0.48
Trav7d-3Q5R1I1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7d-3Q5R1I1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7d-3Q5R1I1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.05■□□□□ 0.48
Trav7d-3Q5R1I1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7d-3Q5R1I1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav7d-3Q5R1I1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7d-3Q5R1I1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7d-3Q5R1I1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav7d-3Q5R1I1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7d-3Q5R1I1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7d-3Q5R1I1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7d-3Q5R1I1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7d-3Q5R1I1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7d-3Q5R1I1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7d-3Q5R1I1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7d-3Q5R1I1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7d-3Q5R1I1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7d-3Q5R1I1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7d-3Q5R1I1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7d-3Q5R1I1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7d-3Q5R1I1 Gm24804-201ENSMUST00000174982 85 ntBASIC17.99■□□□□ 0.47
Trav7d-3Q5R1I1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms