Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sec61a1P61620 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.86■■□□□ 1.09
Sec61a1P61620 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a1P61620 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a1P61620 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a1P61620 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a1P61620 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a1P61620 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.84■■□□□ 1.09
Sec61a1P61620 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec61a1P61620 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec61a1P61620 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sec61a1P61620 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Sec61a1P61620 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sec61a1P61620 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a1P61620 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a1P61620 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a1P61620 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a1P61620 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a1P61620 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sec61a1P61620 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sec61a1P61620 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sec61a1P61620 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Sec61a1P61620 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Sec61a1P61620 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sec61a1P61620 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sec61a1P61620 Peli2-204ENSMUST00000226513 1320 ntBASIC21.74■■□□□ 1.07
Sec61a1P61620 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sec61a1P61620 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Sec61a1P61620 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sec61a1P61620 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sec61a1P61620 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Sec61a1P61620 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sec61a1P61620 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.7■■□□□ 1.07
Sec61a1P61620 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec61a1P61620 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec61a1P61620 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sec61a1P61620 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sec61a1P61620 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec61a1P61620 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec61a1P61620 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Sec61a1P61620 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Sec61a1P61620 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec61a1P61620 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sec61a1P61620 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sec61a1P61620 Amer2-203ENSMUST00000225247 2662 ntBASIC21.65■■□□□ 1.06
Sec61a1P61620 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.65■■□□□ 1.06
Sec61a1P61620 Zfp131-205ENSMUST00000223812 663 ntBASIC21.65■■□□□ 1.06
Sec61a1P61620 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sec61a1P61620 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sec61a1P61620 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sec61a1P61620 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a1P61620 Gm16148-201ENSMUST00000119653 893 ntBASIC21.63■■□□□ 1.05
Sec61a1P61620 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a1P61620 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sec61a1P61620 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sec61a1P61620 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Sec61a1P61620 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Sec61a1P61620 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sec61a1P61620 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sec61a1P61620 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec61a1P61620 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sec61a1P61620 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.6■■□□□ 1.05
Sec61a1P61620 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sec61a1P61620 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sec61a1P61620 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sec61a1P61620 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sec61a1P61620 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sec61a1P61620 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sec61a1P61620 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sec61a1P61620 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.55■■□□□ 1.04
Sec61a1P61620 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.54■■□□□ 1.04
Sec61a1P61620 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sec61a1P61620 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sec61a1P61620 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sec61a1P61620 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sec61a1P61620 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.53■■□□□ 1.04
Sec61a1P61620 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sec61a1P61620 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Sec61a1P61620 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sec61a1P61620 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sec61a1P61620 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec61a1P61620 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sec61a1P61620 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec61a1P61620 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sec61a1P61620 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.51■■□□□ 1.03
Sec61a1P61620 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Sec61a1P61620 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sec61a1P61620 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sec61a1P61620 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sec61a1P61620 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a1P61620 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sec61a1P61620 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a1P61620 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.48■■□□□ 1.03
Sec61a1P61620 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sec61a1P61620 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec61a1P61620 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sec61a1P61620 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Sec61a1P61620 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Sec61a1P61620 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sec61a1P61620 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms