Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.29■■■□□ 2.12
Nek1P51954 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Nek1P51954 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Nek1P51954 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Nek1P51954 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Nek1P51954 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Nek1P51954 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Nek1P51954 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Nek1P51954 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Nek1P51954 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Nek1P51954 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Nek1P51954 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Nek1P51954 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Nek1P51954 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Nek1P51954 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Nek1P51954 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Nek1P51954 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Nek1P51954 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.12■■■□□ 2.09
Nek1P51954 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.11■■■□□ 2.09
Nek1P51954 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Nek1P51954 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Nek1P51954 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.09■■■□□ 2.09
Nek1P51954 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Nek1P51954 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Nek1P51954 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.09■■■□□ 2.09
Nek1P51954 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Nek1P51954 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Nek1P51954 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Nek1P51954 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Nek1P51954 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Nek1P51954 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Nek1P51954 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
Nek1P51954 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Nek1P51954 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.03■■■□□ 2.08
Nek1P51954 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Nek1P51954 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.02■■■□□ 2.08
Nek1P51954 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Nek1P51954 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Nek1P51954 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Nek1P51954 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Nek1P51954 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Nek1P51954 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28■■■□□ 2.07
Nek1P51954 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Nek1P51954 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.99■■■□□ 2.07
Nek1P51954 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Nek1P51954 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Nek1P51954 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.98■■■□□ 2.07
Nek1P51954 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Nek1P51954 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Nek1P51954 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Nek1P51954 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Nek1P51954 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Nek1P51954 Amer2-203ENSMUST00000225247 2662 ntBASIC27.95■■■□□ 2.06
Nek1P51954 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Nek1P51954 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.95■■■□□ 2.06
Nek1P51954 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Nek1P51954 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Nek1P51954 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.94■■■□□ 2.06
Nek1P51954 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Nek1P51954 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Nek1P51954 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Nek1P51954 Gm16148-201ENSMUST00000119653 893 ntBASIC27.9■■■□□ 2.06
Nek1P51954 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.9■■■□□ 2.06
Nek1P51954 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Nek1P51954 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Nek1P51954 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Nek1P51954 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Nek1P51954 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Nek1P51954 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Nek1P51954 Peli2-204ENSMUST00000226513 1320 ntBASIC27.82■■■□□ 2.04
Nek1P51954 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.82■■■□□ 2.04
Nek1P51954 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nek1P51954 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nek1P51954 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Nek1P51954 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Nek1P51954 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Nek1P51954 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Nek1P51954 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Nek1P51954 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Nek1P51954 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.79■■■□□ 2.04
Nek1P51954 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.78■■■□□ 2.04
Nek1P51954 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Nek1P51954 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Nek1P51954 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Nek1P51954 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Nek1P51954 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.04
Nek1P51954 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Nek1P51954 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Nek1P51954 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Nek1P51954 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
Nek1P51954 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Nek1P51954 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Nek1P51954 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Nek1P51954 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Nek1P51954 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Nek1P51954 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Nek1P51954 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Nek1P51954 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nek1P51954 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Nek1P51954 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms