Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 TIM17YJL143W 477 nt8.64□□□□□ -1.03
LSM4P40070 YNR029CYNR029C 1290 nt8.64□□□□□ -1.03
LSM4P40070 HEM12YDR047W 1089 nt8.63□□□□□ -1.03
LSM4P40070 YLR349WYLR349W 507 nt8.63□□□□□ -1.03
LSM4P40070 MUP1YGR055W 1725 nt8.62□□□□□ -1.03
LSM4P40070 ACO2YJL200C 2370 nt8.62□□□□□ -1.03
LSM4P40070 MIC10YCL057C-A 294 nt8.61□□□□□ -1.03
LSM4P40070 TPO4YOR273C 1980 nt8.61□□□□□ -1.03
LSM4P40070 YIR016WYIR016W 798 nt8.6□□□□□ -1.03
LSM4P40070 UGA4YDL210W 1716 nt8.6□□□□□ -1.03
LSM4P40070 HMG2YLR450W 3138 nt8.59□□□□□ -1.03
LSM4P40070 PHO89YBR296C 1725 nt8.57□□□□□ -1.04
LSM4P40070 STE4YOR212W 1272 nt8.57□□□□□ -1.04
LSM4P40070 SHM2YLR058C 1410 nt8.56□□□□□ -1.04
LSM4P40070 NIT1YIL164C 600 nt8.56□□□□□ -1.04
LSM4P40070 DUS1YML080W 1272 nt8.56□□□□□ -1.04
LSM4P40070 GID7YCL039W 2238 nt8.56□□□□□ -1.04
LSM4P40070 SGT2YOR007C 1041 nt8.52□□□□□ -1.05
LSM4P40070 YLR111WYLR111W 333 nt8.51□□□□□ -1.05
LSM4P40070 YLR437C-AYLR437C-A 228 nt8.51□□□□□ -1.05
LSM4P40070 COQ2YNR041C 1119 nt8.49□□□□□ -1.05
LSM4P40070 FUN14YAL008W 597 nt8.48□□□□□ -1.05
LSM4P40070 AGP1YCL025C 1902 nt8.48□□□□□ -1.05
LSM4P40070 XDJ1YLR090W 1380 nt8.47□□□□□ -1.05
LSM4P40070 MRP20YDR405W 792 nt8.46□□□□□ -1.06
LSM4P40070 RAD23YEL037C 1197 nt8.45□□□□□ -1.06
LSM4P40070 HOL1YNR055C 1761 nt8.44□□□□□ -1.06
LSM4P40070 ADH7YCR105W 1086 nt8.44□□□□□ -1.06
LSM4P40070 URA8YJR103W 1737 nt8.43□□□□□ -1.06
LSM4P40070 BNA2YJR078W 1362 nt8.43□□□□□ -1.06
LSM4P40070 PAU15YIR041W 375 nt8.42□□□□□ -1.06
LSM4P40070 CAB5YDR196C 726 nt8.41□□□□□ -1.06
LSM4P40070 SFA1YDL168W 1161 nt8.4□□□□□ -1.06
LSM4P40070 SSN3YPL042C 1668 nt8.4□□□□□ -1.07
LSM4P40070 RPL4BYDR012W 1089 nt8.39□□□□□ -1.07
LSM4P40070 RPL4AYBR031W 1089 nt8.39□□□□□ -1.07
LSM4P40070 MIC12YBR262C 321 nt8.39□□□□□ -1.07
LSM4P40070 YMR209CYMR209C 1374 nt8.38□□□□□ -1.07
LSM4P40070 FRE6YLL051C 2139 nt8.38□□□□□ -1.07
LSM4P40070 GDH3YAL062W 1374 nt8.37□□□□□ -1.07
LSM4P40070 RIB3YDR487C 627 nt8.37□□□□□ -1.07
LSM4P40070 RPS14BYJL191W 417 nt8.37□□□□□ -1.07
LSM4P40070 YJL195CYJL195C 702 nt8.37□□□□□ -1.07
LSM4P40070 YLR279WYLR279W 390 nt8.37□□□□□ -1.07
LSM4P40070 ESS1YJR017C 513 nt8.36□□□□□ -1.07
LSM4P40070 YHL008CYHL008C 1884 nt8.36□□□□□ -1.07
LSM4P40070 RDN18-1RDN18-1 1800 nt8.35□□□□□ -1.07
LSM4P40070 RDN18-2RDN18-2 1800 nt8.35□□□□□ -1.07
LSM4P40070 ADH1YOL086C 1047 nt8.32□□□□□ -1.08
LSM4P40070 YGR201CYGR201C 678 nt8.31□□□□□ -1.08
LSM4P40070 SDH5YOL071W 489 nt8.3□□□□□ -1.08
LSM4P40070 PUP1YOR157C 786 nt8.3□□□□□ -1.08
LSM4P40070 HHO1YPL127C 777 nt8.3□□□□□ -1.08
LSM4P40070 STR3YGL184C 1398 nt8.3□□□□□ -1.08
LSM4P40070 CLB6YGR109C 1143 nt8.29□□□□□ -1.08
LSM4P40070 HIF1YLL022C 1158 nt8.29□□□□□ -1.08
LSM4P40070 HXK1YFR053C 1458 nt8.29□□□□□ -1.08
LSM4P40070 RTN2YDL204W 1182 nt8.28□□□□□ -1.08
LSM4P40070 YEL008WYEL008W 381 nt8.27□□□□□ -1.09
LSM4P40070 TSC10YBR265W 963 nt8.27□□□□□ -1.09
LSM4P40070 YGR012WYGR012W 1182 nt8.26□□□□□ -1.09
LSM4P40070 YHL019W-AYHL019W-A 594 nt8.26□□□□□ -1.09
LSM4P40070 THI72YOR192C 1800 nt8.25□□□□□ -1.09
LSM4P40070 HIS2YFR025C 1008 nt8.25□□□□□ -1.09
LSM4P40070 CPD1YGR247W 720 nt8.25□□□□□ -1.09
LSM4P40070 NAP1YKR048C 1254 nt8.25□□□□□ -1.09
LSM4P40070 UTH1YKR042W 1098 nt8.24□□□□□ -1.09
LSM4P40070 PSD1YNL169C 1503 nt8.24□□□□□ -1.09
LSM4P40070 ALD5YER073W 1563 nt8.23□□□□□ -1.09
LSM4P40070 YCR102CYCR102C 1107 nt8.23□□□□□ -1.09
LSM4P40070 ALD4YOR374W 1560 nt8.22□□□□□ -1.09
LSM4P40070 tS(GCU)LtS(GCU)L 80 nt8.21□□□□□ -1.1
LSM4P40070 YNL024CYNL024C 741 nt8.21□□□□□ -1.1
LSM4P40070 GPN2YOR262W 1044 nt8.21□□□□□ -1.1
LSM4P40070 ILV2YMR108W 2064 nt8.21□□□□□ -1.1
LSM4P40070 GTB1YDR221W 2109 nt8.2□□□□□ -1.1
LSM4P40070 YPI1YFR003C 468 nt8.2□□□□□ -1.1
LSM4P40070 AQY2YLL052C 450 nt8.2□□□□□ -1.1
LSM4P40070 HIP1YGR191W 1812 nt8.19□□□□□ -1.1
LSM4P40070 SEN2YLR105C 1134 nt8.19□□□□□ -1.1
LSM4P40070 CYT1YOR065W 930 nt8.19□□□□□ -1.1
LSM4P40070 AVT6YER119C 1347 nt8.19□□□□□ -1.1
LSM4P40070 SHH4YLR164W 507 nt8.17□□□□□ -1.1
LSM4P40070 ILV3YJR016C 1758 nt8.17□□□□□ -1.1
LSM4P40070 UGP1YKL035W 1500 nt8.16□□□□□ -1.1
LSM4P40070 ZRT3YKL175W 1512 nt8.16□□□□□ -1.1
LSM4P40070 ESBP6YNL125C 2022 nt8.16□□□□□ -1.1
LSM4P40070 TIR3YIL011W 810 nt8.15□□□□□ -1.1
LSM4P40070 YJR114WYJR114W 393 nt8.15□□□□□ -1.1
LSM4P40070 DUT1YBR252W 444 nt8.14□□□□□ -1.11
LSM4P40070 GAL2YLR081W 1725 nt8.13□□□□□ -1.11
LSM4P40070 YBR232CYBR232C 360 nt8.13□□□□□ -1.11
LSM4P40070 NRT1YOR071C 1797 nt8.12□□□□□ -1.11
LSM4P40070 POM34YLR018C 900 nt8.12□□□□□ -1.11
LSM4P40070 TOM6YOR045W 186 nt8.12□□□□□ -1.11
LSM4P40070 COQ8YGL119W 1506 nt8.12□□□□□ -1.11
LSM4P40070 NBP35YGL091C 987 nt8.11□□□□□ -1.11
LSM4P40070 GOR1YNL274C 1053 nt8.11□□□□□ -1.11
LSM4P40070 MSB4YOL112W 1479 nt8.11□□□□□ -1.11
LSM4P40070 YPL222C-AYPL222C-A 246 nt8.1□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms