Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 PRO1YDR300C 1287 nt9.51□□□□□ -0.89
TY2A-LR1P0C2J4 COQ2YNR041C 1119 nt9.51□□□□□ -0.89
TY2A-LR1P0C2J4 IRC24YIR036C 792 nt9.5□□□□□ -0.89
TY2A-LR1P0C2J4 AIM45YPR004C 1035 nt9.5□□□□□ -0.89
TY2A-LR1P0C2J4 POM34YLR018C 900 nt9.49□□□□□ -0.89
TY2A-LR1P0C2J4 RPM1RPM1 483 nt9.49□□□□□ -0.89
TY2A-LR1P0C2J4 YML089CYML089C 369 nt9.48□□□□□ -0.89
TY2A-LR1P0C2J4 TOM6YOR045W 186 nt9.48□□□□□ -0.89
TY2A-LR1P0C2J4 ATG15YCR068W 1563 nt9.48□□□□□ -0.89
TY2A-LR1P0C2J4 FRE6YLL051C 2139 nt9.47□□□□□ -0.89
TY2A-LR1P0C2J4 RBG1YAL036C 1110 nt9.47□□□□□ -0.89
TY2A-LR1P0C2J4 MCH5YOR306C 1566 nt9.46□□□□□ -0.9
TY2A-LR1P0C2J4 GAP1YKR039W 1809 nt9.45□□□□□ -0.9
TY2A-LR1P0C2J4 SNF1YDR477W 1902 nt9.44□□□□□ -0.9
TY2A-LR1P0C2J4 NDI1YML120C 1542 nt9.43□□□□□ -0.9
TY2A-LR1P0C2J4 PEX2YJL210W 816 nt9.43□□□□□ -0.9
TY2A-LR1P0C2J4 RPL4BYDR012W 1089 nt9.41□□□□□ -0.9
TY2A-LR1P0C2J4 SBA1YKL117W 651 nt9.41□□□□□ -0.9
TY2A-LR1P0C2J4 RPL4AYBR031W 1089 nt9.41□□□□□ -0.9
TY2A-LR1P0C2J4 CLB6YGR109C 1143 nt9.4□□□□□ -0.9
TY2A-LR1P0C2J4 HIP1YGR191W 1812 nt9.39□□□□□ -0.91
TY2A-LR1P0C2J4 UTH1YKR042W 1098 nt9.38□□□□□ -0.91
TY2A-LR1P0C2J4 ALG12YNR030W 1656 nt9.38□□□□□ -0.91
TY2A-LR1P0C2J4 UTR1YJR049C 1593 nt9.37□□□□□ -0.91
TY2A-LR1P0C2J4 TIF6YPR016C 738 nt9.37□□□□□ -0.91
TY2A-LR1P0C2J4 PRM5YIL117C 957 nt9.35□□□□□ -0.91
TY2A-LR1P0C2J4 NRT1YOR071C 1797 nt9.35□□□□□ -0.91
TY2A-LR1P0C2J4 SAM35YHR083W 990 nt9.34□□□□□ -0.91
TY2A-LR1P0C2J4 MET28YIR017C 564 nt9.34□□□□□ -0.91
TY2A-LR1P0C2J4 RPS14BYJL191W 417 nt9.34□□□□□ -0.91
TY2A-LR1P0C2J4 BIO5YNR056C 1686 nt9.33□□□□□ -0.92
TY2A-LR1P0C2J4 GLR1YPL091W 1452 nt9.32□□□□□ -0.92
TY2A-LR1P0C2J4 DIF1YLR437C 402 nt9.3□□□□□ -0.92
TY2A-LR1P0C2J4 SDH5YOL071W 489 nt9.28□□□□□ -0.92
TY2A-LR1P0C2J4 ALD4YOR374W 1560 nt9.26□□□□□ -0.93
TY2A-LR1P0C2J4 YAR028WYAR028W 705 nt9.25□□□□□ -0.93
TY2A-LR1P0C2J4 FIT3YOR383C 615 nt9.25□□□□□ -0.93
TY2A-LR1P0C2J4 YMR244WYMR244W 1068 nt9.24□□□□□ -0.93
TY2A-LR1P0C2J4 TSC10YBR265W 963 nt9.24□□□□□ -0.93
TY2A-LR1P0C2J4 HIF1YLL022C 1158 nt9.22□□□□□ -0.93
TY2A-LR1P0C2J4 YLR111WYLR111W 333 nt9.21□□□□□ -0.94
TY2A-LR1P0C2J4 AKR2YOR034C 2250 nt9.19□□□□□ -0.94
TY2A-LR1P0C2J4 YGR012WYGR012W 1182 nt9.18□□□□□ -0.94
TY2A-LR1P0C2J4 NAR1YNL240C 1476 nt9.18□□□□□ -0.94
TY2A-LR1P0C2J4 NME1NME1 340 nt9.18□□□□□ -0.94
TY2A-LR1P0C2J4 ALP1YNL270C 1722 nt9.17□□□□□ -0.94
TY2A-LR1P0C2J4 MTG2YHR168W 1557 nt9.16□□□□□ -0.94
TY2A-LR1P0C2J4 SED1YDR077W 1017 nt9.16□□□□□ -0.94
TY2A-LR1P0C2J4 ZTA1YBR046C 1005 nt9.16□□□□□ -0.94
TY2A-LR1P0C2J4 YLR279WYLR279W 390 nt9.15□□□□□ -0.94
TY2A-LR1P0C2J4 RAD23YEL037C 1197 nt9.14□□□□□ -0.95
TY2A-LR1P0C2J4 YMR226CYMR226C 804 nt9.14□□□□□ -0.95
TY2A-LR1P0C2J4 HXT1YHR094C 1713 nt9.14□□□□□ -0.95
TY2A-LR1P0C2J4 CYT2YKL087C 675 nt9.13□□□□□ -0.95
TY2A-LR1P0C2J4 LIP1YMR298W 453 nt9.13□□□□□ -0.95
TY2A-LR1P0C2J4 PBP1YGR178C 2169 nt9.13□□□□□ -0.95
TY2A-LR1P0C2J4 YER190C-AYER190C-A 576 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 YGR296C-AYGR296C-A 576 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 YML133W-AYML133W-A 576 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 YNL339W-AYNL339W-A 576 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 YPL283W-AYPL283W-A 576 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 DBP1YPL119C 1854 nt9.11□□□□□ -0.95
TY2A-LR1P0C2J4 MSB4YOL112W 1479 nt9.1□□□□□ -0.95
TY2A-LR1P0C2J4 RBG2YGR173W 1107 nt9.1□□□□□ -0.95
TY2A-LR1P0C2J4 YBL086CYBL086C 1401 nt9.06□□□□□ -0.96
TY2A-LR1P0C2J4 SAM1YLR180W 1149 nt9.06□□□□□ -0.96
TY2A-LR1P0C2J4 YPL222C-AYPL222C-A 246 nt9.05□□□□□ -0.96
TY2A-LR1P0C2J4 ZRT3YKL175W 1512 nt9.04□□□□□ -0.96
TY2A-LR1P0C2J4 RIB3YDR487C 627 nt9.03□□□□□ -0.96
TY2A-LR1P0C2J4 YPL251WYPL251W 303 nt9.02□□□□□ -0.97
TY2A-LR1P0C2J4 SHY1YGR112W 1170 nt9.01□□□□□ -0.97
TY2A-LR1P0C2J4 TOA2YKL058W 369 nt9.01□□□□□ -0.97
TY2A-LR1P0C2J4 BRR1YPR057W 1026 nt9.01□□□□□ -0.97
TY2A-LR1P0C2J4 CAB5YDR196C 726 nt9□□□□□ -0.97
TY2A-LR1P0C2J4 YLR437C-AYLR437C-A 228 nt8.99□□□□□ -0.97
TY2A-LR1P0C2J4 LEU9YOR108W 1815 nt8.98□□□□□ -0.97
TY2A-LR1P0C2J4 MEP3YPR138C 1470 nt8.97□□□□□ -0.97
TY2A-LR1P0C2J4 UGA4YDL210W 1716 nt8.96□□□□□ -0.98
TY2A-LR1P0C2J4 GND1YHR183W 1470 nt8.95□□□□□ -0.98
TY2A-LR1P0C2J4 YMR103CYMR103C 363 nt8.94□□□□□ -0.98
TY2A-LR1P0C2J4 FCY21YER060W 1587 nt8.94□□□□□ -0.98
TY2A-LR1P0C2J4 LOT5YKL183W 921 nt8.93□□□□□ -0.98
TY2A-LR1P0C2J4 GND2YGR256W 1479 nt8.93□□□□□ -0.98
TY2A-LR1P0C2J4 APT2YDR441C 546 nt8.92□□□□□ -0.98
TY2A-LR1P0C2J4 TRT2tT(CGU)K 72 nt8.92□□□□□ -0.98
TY2A-LR1P0C2J4 YJL067WYJL067W 351 nt8.92□□□□□ -0.98
TY2A-LR1P0C2J4 UFO1YML088W 2007 nt8.92□□□□□ -0.98
TY2A-LR1P0C2J4 URA6YKL024C 615 nt8.91□□□□□ -0.98
TY2A-LR1P0C2J4 YAT1YAR035W 2064 nt8.91□□□□□ -0.98
TY2A-LR1P0C2J4 SMM1YNR015W 1155 nt8.9□□□□□ -0.98
TY2A-LR1P0C2J4 SAM2YDR502C 1155 nt8.89□□□□□ -0.99
TY2A-LR1P0C2J4 OYE3YPL171C 1203 nt8.89□□□□□ -0.99
TY2A-LR1P0C2J4 PRY1YJL079C 900 nt8.88□□□□□ -0.99
TY2A-LR1P0C2J4 INA1YLR413W 2028 nt8.88□□□□□ -0.99
TY2A-LR1P0C2J4 CMP2YML057W 1815 nt8.87□□□□□ -0.99
TY2A-LR1P0C2J4 PET8YNL003C 855 nt8.86□□□□□ -0.99
TY2A-LR1P0C2J4 SSN3YPL042C 1668 nt8.85□□□□□ -0.99
TY2A-LR1P0C2J4 YPI1YFR003C 468 nt8.84□□□□□ -0.99
TY2A-LR1P0C2J4 LSB3YFR024C-A 1380 nt8.84□□□□□ -0.99
TY2A-LR1P0C2J4 SEC61YLR378C 1443 nt8.82□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 55.5 ms