Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P06323 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06323 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P06323 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P06323 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P06323 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P06323 Gm8109-201ENSMUST00000194076 746 ntBASIC20.22■□□□□ 0.83
P06323 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P06323 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P06323 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
P06323 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P06323 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
P06323 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P06323 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06323 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
P06323 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06323 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
P06323 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06323 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P06323 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P06323 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06323 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06323 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
P06323 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.15■□□□□ 0.82
P06323 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
P06323 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P06323 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P06323 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.14■□□□□ 0.81
P06323 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P06323 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
P06323 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P06323 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P06323 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P06323 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06323 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.11■□□□□ 0.81
P06323 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
P06323 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
P06323 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
P06323 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.07■□□□□ 0.8
P06323 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P06323 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P06323 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06323 Peli2-204ENSMUST00000226513 1320 ntBASIC20.04■□□□□ 0.8
P06323 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P06323 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06323 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.03■□□□□ 0.8
P06323 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06323 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06323 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.03■□□□□ 0.8
P06323 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06323 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
P06323 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06323 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06323 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P06323 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20■□□□□ 0.79
P06323 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06323 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06323 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P06323 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06323 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06323 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
P06323 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
P06323 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06323 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
P06323 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06323 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06323 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06323 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06323 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
P06323 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06323 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06323 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P06323 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06323 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06323 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P06323 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.93■□□□□ 0.78
P06323 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P06323 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P06323 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
P06323 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06323 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P06323 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
P06323 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.9■□□□□ 0.78
P06323 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P06323 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06323 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.88■□□□□ 0.77
P06323 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06323 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P06323 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06323 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
P06323 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
P06323 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06323 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06323 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P06323 Amer2-203ENSMUST00000225247 2662 ntBASIC19.86■□□□□ 0.77
P06323 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06323 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06323 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
P06323 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
P06323 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms