Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn2O70591 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.61■□□□□ 0.89
Pfdn2O70591 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.61■□□□□ 0.89
Pfdn2O70591 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pfdn2O70591 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Pfdn2O70591 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn2O70591 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Pfdn2O70591 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pfdn2O70591 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn2O70591 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn2O70591 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn2O70591 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pfdn2O70591 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pfdn2O70591 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pfdn2O70591 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn2O70591 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn2O70591 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn2O70591 Gm25262-201ENSMUST00000174934 133 ntBASIC20.56■□□□□ 0.88
Pfdn2O70591 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pfdn2O70591 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn2O70591 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn2O70591 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn2O70591 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn2O70591 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn2O70591 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn2O70591 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pfdn2O70591 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Pfdn2O70591 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pfdn2O70591 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.52■□□□□ 0.87
Pfdn2O70591 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn2O70591 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn2O70591 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.5■□□□□ 0.87
Pfdn2O70591 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn2O70591 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn2O70591 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pfdn2O70591 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Pfdn2O70591 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn2O70591 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.48■□□□□ 0.87
Pfdn2O70591 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn2O70591 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pfdn2O70591 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pfdn2O70591 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pfdn2O70591 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pfdn2O70591 Mipep-204ENSMUST00000225043 1548 ntBASIC20.43■□□□□ 0.86
Pfdn2O70591 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pfdn2O70591 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pfdn2O70591 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pfdn2O70591 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pfdn2O70591 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pfdn2O70591 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Pfdn2O70591 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pfdn2O70591 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pfdn2O70591 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pfdn2O70591 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pfdn2O70591 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pfdn2O70591 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pfdn2O70591 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pfdn2O70591 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pfdn2O70591 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.34■□□□□ 0.85
Pfdn2O70591 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn2O70591 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn2O70591 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.34■□□□□ 0.85
Pfdn2O70591 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Pfdn2O70591 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn2O70591 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn2O70591 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn2O70591 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn2O70591 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.31■□□□□ 0.84
Pfdn2O70591 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn2O70591 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pfdn2O70591 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn2O70591 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.3■□□□□ 0.84
Pfdn2O70591 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn2O70591 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn2O70591 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.29■□□□□ 0.84
Pfdn2O70591 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn2O70591 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn2O70591 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pfdn2O70591 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pfdn2O70591 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pfdn2O70591 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn2O70591 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn2O70591 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn2O70591 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn2O70591 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn2O70591 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn2O70591 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pfdn2O70591 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pfdn2O70591 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn2O70591 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pfdn2O70591 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn2O70591 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn2O70591 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.21■□□□□ 0.83
Pfdn2O70591 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pfdn2O70591 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pfdn2O70591 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.19■□□□□ 0.82
Pfdn2O70591 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pfdn2O70591 Amer2-203ENSMUST00000225247 2662 ntBASIC20.19■□□□□ 0.82
Pfdn2O70591 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pfdn2O70591 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms