Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NpcdF8VQB8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NpcdF8VQB8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NpcdF8VQB8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NpcdF8VQB8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
NpcdF8VQB8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NpcdF8VQB8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NpcdF8VQB8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.19■■■□□ 2.58
NpcdF8VQB8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
NpcdF8VQB8 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.18■■■□□ 2.58
NpcdF8VQB8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NpcdF8VQB8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
NpcdF8VQB8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NpcdF8VQB8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
NpcdF8VQB8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NpcdF8VQB8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NpcdF8VQB8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.07■■■□□ 2.56
NpcdF8VQB8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.07■■■□□ 2.56
NpcdF8VQB8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NpcdF8VQB8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
NpcdF8VQB8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NpcdF8VQB8 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.04■■■□□ 2.56
NpcdF8VQB8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NpcdF8VQB8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NpcdF8VQB8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
NpcdF8VQB8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.01■■■□□ 2.55
NpcdF8VQB8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NpcdF8VQB8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
NpcdF8VQB8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.99■■■□□ 2.55
NpcdF8VQB8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.99■■■□□ 2.55
NpcdF8VQB8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NpcdF8VQB8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
NpcdF8VQB8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NpcdF8VQB8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.94■■■□□ 2.54
NpcdF8VQB8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NpcdF8VQB8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
NpcdF8VQB8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Gm7432-201ENSMUST00000210343 879 ntBASIC30.92■■■□□ 2.54
NpcdF8VQB8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
NpcdF8VQB8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NpcdF8VQB8 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.89■■■□□ 2.54
NpcdF8VQB8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NpcdF8VQB8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
NpcdF8VQB8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NpcdF8VQB8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NpcdF8VQB8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NpcdF8VQB8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.79■■■□□ 2.52
NpcdF8VQB8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.79■■■□□ 2.52
NpcdF8VQB8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NpcdF8VQB8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
NpcdF8VQB8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
NpcdF8VQB8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
NpcdF8VQB8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.78■■■□□ 2.52
NpcdF8VQB8 Nkain2-201ENSMUST00000092602 558 ntBASIC30.76■■■□□ 2.51
NpcdF8VQB8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NpcdF8VQB8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
NpcdF8VQB8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NpcdF8VQB8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.72■■■□□ 2.51
NpcdF8VQB8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NpcdF8VQB8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
NpcdF8VQB8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
NpcdF8VQB8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
NpcdF8VQB8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.69■■■□□ 2.5
NpcdF8VQB8 Mir6538-201ENSMUST00000183713 110 ntBASIC30.69■■■□□ 2.5
NpcdF8VQB8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
NpcdF8VQB8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NpcdF8VQB8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NpcdF8VQB8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
NpcdF8VQB8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NpcdF8VQB8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NpcdF8VQB8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
NpcdF8VQB8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
NpcdF8VQB8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
NpcdF8VQB8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NpcdF8VQB8 Gm11599-201ENSMUST00000118720 878 ntBASIC30.61■■■□□ 2.49
NpcdF8VQB8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NpcdF8VQB8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NpcdF8VQB8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.58■■■□□ 2.49
NpcdF8VQB8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NpcdF8VQB8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
NpcdF8VQB8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NpcdF8VQB8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.56■■■□□ 2.48
NpcdF8VQB8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
NpcdF8VQB8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.53■■■□□ 2.48
NpcdF8VQB8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NpcdF8VQB8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NpcdF8VQB8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.51■■■□□ 2.48
NpcdF8VQB8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
NpcdF8VQB8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NpcdF8VQB8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.5■■■□□ 2.47
NpcdF8VQB8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NpcdF8VQB8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NpcdF8VQB8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
NpcdF8VQB8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NpcdF8VQB8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
NpcdF8VQB8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms