Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcna-ps2A0A140T8V5 Zxda-201ENSMUST00000117281 2621 ntBASIC25.24■■□□□ 1.63
Pcna-ps2A0A140T8V5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcna-ps2A0A140T8V5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcna-ps2A0A140T8V5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcna-ps2A0A140T8V5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Pcna-ps2A0A140T8V5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcna-ps2A0A140T8V5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcna-ps2A0A140T8V5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcna-ps2A0A140T8V5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.21■■□□□ 1.63
Pcna-ps2A0A140T8V5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcna-ps2A0A140T8V5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcna-ps2A0A140T8V5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcna-ps2A0A140T8V5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Pcna-ps2A0A140T8V5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcna-ps2A0A140T8V5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Pcna-ps2A0A140T8V5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Pcna-ps2A0A140T8V5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcna-ps2A0A140T8V5 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.09■■□□□ 1.61
Pcna-ps2A0A140T8V5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Pcna-ps2A0A140T8V5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcna-ps2A0A140T8V5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcna-ps2A0A140T8V5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcna-ps2A0A140T8V5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pcna-ps2A0A140T8V5 Gm16148-201ENSMUST00000119653 893 ntBASIC25.06■■□□□ 1.6
Pcna-ps2A0A140T8V5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcna-ps2A0A140T8V5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcna-ps2A0A140T8V5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.03■■□□□ 1.6
Pcna-ps2A0A140T8V5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcna-ps2A0A140T8V5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
Pcna-ps2A0A140T8V5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcna-ps2A0A140T8V5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcna-ps2A0A140T8V5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcna-ps2A0A140T8V5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcna-ps2A0A140T8V5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcna-ps2A0A140T8V5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcna-ps2A0A140T8V5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcna-ps2A0A140T8V5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcna-ps2A0A140T8V5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcna-ps2A0A140T8V5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
Pcna-ps2A0A140T8V5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcna-ps2A0A140T8V5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.96■■□□□ 1.59
Pcna-ps2A0A140T8V5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcna-ps2A0A140T8V5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcna-ps2A0A140T8V5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Pcna-ps2A0A140T8V5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
Pcna-ps2A0A140T8V5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcna-ps2A0A140T8V5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcna-ps2A0A140T8V5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcna-ps2A0A140T8V5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.92■■□□□ 1.58
Pcna-ps2A0A140T8V5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcna-ps2A0A140T8V5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcna-ps2A0A140T8V5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcna-ps2A0A140T8V5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcna-ps2A0A140T8V5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Pcna-ps2A0A140T8V5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcna-ps2A0A140T8V5 Amer2-203ENSMUST00000225247 2662 ntBASIC24.89■■□□□ 1.58
Pcna-ps2A0A140T8V5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcna-ps2A0A140T8V5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcna-ps2A0A140T8V5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcna-ps2A0A140T8V5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.85■■□□□ 1.57
Pcna-ps2A0A140T8V5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcna-ps2A0A140T8V5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcna-ps2A0A140T8V5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcna-ps2A0A140T8V5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcna-ps2A0A140T8V5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcna-ps2A0A140T8V5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcna-ps2A0A140T8V5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Pcna-ps2A0A140T8V5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcna-ps2A0A140T8V5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcna-ps2A0A140T8V5 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.81■■□□□ 1.56
Pcna-ps2A0A140T8V5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Pcna-ps2A0A140T8V5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Pcna-ps2A0A140T8V5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcna-ps2A0A140T8V5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcna-ps2A0A140T8V5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcna-ps2A0A140T8V5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcna-ps2A0A140T8V5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcna-ps2A0A140T8V5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.78■■□□□ 1.56
Pcna-ps2A0A140T8V5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcna-ps2A0A140T8V5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
Pcna-ps2A0A140T8V5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Pcna-ps2A0A140T8V5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Pcna-ps2A0A140T8V5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcna-ps2A0A140T8V5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcna-ps2A0A140T8V5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcna-ps2A0A140T8V5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcna-ps2A0A140T8V5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcna-ps2A0A140T8V5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcna-ps2A0A140T8V5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Pcna-ps2A0A140T8V5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcna-ps2A0A140T8V5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcna-ps2A0A140T8V5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcna-ps2A0A140T8V5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Pcna-ps2A0A140T8V5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Pcna-ps2A0A140T8V5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcna-ps2A0A140T8V5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcna-ps2A0A140T8V5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcna-ps2A0A140T8V5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcna-ps2A0A140T8V5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms