Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31,94■■■□□ 2,7
Frmpd3A0A140LIW3 Gm43863-201ENSMUST00000203822 1192 ntBASIC31,9■■■□□ 2,7
Frmpd3A0A140LIW3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31,9■■■□□ 2,7
Frmpd3A0A140LIW3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31,9■■■□□ 2,7
Frmpd3A0A140LIW3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Frmpd3A0A140LIW3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31,86■■■□□ 2,69
Frmpd3A0A140LIW3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Frmpd3A0A140LIW3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31,86■■■□□ 2,69
Frmpd3A0A140LIW3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Frmpd3A0A140LIW3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Frmpd3A0A140LIW3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Frmpd3A0A140LIW3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Frmpd3A0A140LIW3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31,8■■■□□ 2,68
Frmpd3A0A140LIW3 Gm42809-201ENSMUST00000198429 1138 ntBASIC31,79■■■□□ 2,68
Frmpd3A0A140LIW3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31,79■■■□□ 2,68
Frmpd3A0A140LIW3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Frmpd3A0A140LIW3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31,78■■■□□ 2,68
Frmpd3A0A140LIW3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,78■■■□□ 2,68
Frmpd3A0A140LIW3 AC157572.2-201ENSMUST00000226970 908 ntBASIC31,76■■■□□ 2,68
Frmpd3A0A140LIW3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Frmpd3A0A140LIW3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31,76■■■□□ 2,67
Frmpd3A0A140LIW3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Frmpd3A0A140LIW3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31,76■■■□□ 2,67
Frmpd3A0A140LIW3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31,75■■■□□ 2,67
Frmpd3A0A140LIW3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31,74■■■□□ 2,67
Frmpd3A0A140LIW3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31,73■■■□□ 2,67
Frmpd3A0A140LIW3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Frmpd3A0A140LIW3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Frmpd3A0A140LIW3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31,71■■■□□ 2,67
Frmpd3A0A140LIW3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Frmpd3A0A140LIW3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31,67■■■□□ 2,66
Frmpd3A0A140LIW3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,65
Frmpd3A0A140LIW3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Frmpd3A0A140LIW3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31,61■■■□□ 2,65
Frmpd3A0A140LIW3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31,59■■■□□ 2,65
Frmpd3A0A140LIW3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Frmpd3A0A140LIW3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31,57■■■□□ 2,64
Frmpd3A0A140LIW3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31,53■■■□□ 2,64
Frmpd3A0A140LIW3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Frmpd3A0A140LIW3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Frmpd3A0A140LIW3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31,51■■■□□ 2,63
Frmpd3A0A140LIW3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31,49■■■□□ 2,63
Frmpd3A0A140LIW3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Frmpd3A0A140LIW3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31,47■■■□□ 2,63
Frmpd3A0A140LIW3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Frmpd3A0A140LIW3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31,46■■■□□ 2,63
Frmpd3A0A140LIW3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,46■■■□□ 2,63
Frmpd3A0A140LIW3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31,45■■■□□ 2,63
Frmpd3A0A140LIW3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31,45■■■□□ 2,63
Frmpd3A0A140LIW3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31,45■■■□□ 2,62
Frmpd3A0A140LIW3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31,44■■■□□ 2,62
Frmpd3A0A140LIW3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31,43■■■□□ 2,62
Frmpd3A0A140LIW3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31,42■■■□□ 2,62
Frmpd3A0A140LIW3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31,42■■■□□ 2,62
Frmpd3A0A140LIW3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31,42■■■□□ 2,62
Frmpd3A0A140LIW3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31,4■■■□□ 2,62
Frmpd3A0A140LIW3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31,39■■■□□ 2,62
Frmpd3A0A140LIW3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31,38■■■□□ 2,61
Frmpd3A0A140LIW3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Frmpd3A0A140LIW3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Frmpd3A0A140LIW3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Frmpd3A0A140LIW3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,35■■■□□ 2,61
Frmpd3A0A140LIW3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31,33■■■□□ 2,61
Frmpd3A0A140LIW3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31,33■■■□□ 2,61
Frmpd3A0A140LIW3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31,33■■■□□ 2,61
Frmpd3A0A140LIW3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31,32■■■□□ 2,6
Frmpd3A0A140LIW3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31,32■■■□□ 2,6
Frmpd3A0A140LIW3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31,32■■■□□ 2,6
Frmpd3A0A140LIW3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,31■■■□□ 2,6
Frmpd3A0A140LIW3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Frmpd3A0A140LIW3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31,3■■■□□ 2,6
Frmpd3A0A140LIW3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Frmpd3A0A140LIW3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Frmpd3A0A140LIW3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31,29■■■□□ 2,6
Frmpd3A0A140LIW3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31,28■■■□□ 2,6
Frmpd3A0A140LIW3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31,28■■■□□ 2,6
Frmpd3A0A140LIW3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31,27■■■□□ 2,6
Frmpd3A0A140LIW3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31,25■■■□□ 2,59
Frmpd3A0A140LIW3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31,25■■■□□ 2,59
Frmpd3A0A140LIW3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Frmpd3A0A140LIW3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31,21■■■□□ 2,59
Frmpd3A0A140LIW3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31,2■■■□□ 2,59
Frmpd3A0A140LIW3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31,2■■■□□ 2,59
Frmpd3A0A140LIW3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31,2■■■□□ 2,58
Frmpd3A0A140LIW3 Nkain2-201ENSMUST00000092602 558 ntBASIC31,2■■■□□ 2,58
Frmpd3A0A140LIW3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Frmpd3A0A140LIW3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31,19■■■□□ 2,58
Frmpd3A0A140LIW3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31,19■■■□□ 2,58
Frmpd3A0A140LIW3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31,19■■■□□ 2,58
Frmpd3A0A140LIW3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Frmpd3A0A140LIW3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Frmpd3A0A140LIW3 Gm7432-201ENSMUST00000210343 879 ntBASIC31,17■■■□□ 2,58
Frmpd3A0A140LIW3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31,15■■■□□ 2,58
Frmpd3A0A140LIW3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31,15■■■□□ 2,58
Frmpd3A0A140LIW3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Frmpd3A0A140LIW3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31,12■■■□□ 2,57
Frmpd3A0A140LIW3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31,12■■■□□ 2,57
Frmpd3A0A140LIW3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31,12■■■□□ 2,57
Frmpd3A0A140LIW3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31,12■■■□□ 2,57
Frmpd3A0A140LIW3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31,11■■■□□ 2,57
Retrieved 100 of 76,532 protein–RNA pairs in 32,8 ms