Protein–RNA interactions for Protein: A0A0B4J1H7

Igkv1-135, Immunoglobulin kappa variable 1-135 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-135A0A0B4J1H7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv1-135A0A0B4J1H7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv1-135A0A0B4J1H7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.31■■□□□ 1
Igkv1-135A0A0B4J1H7 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.3■■□□□ 1
Igkv1-135A0A0B4J1H7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv1-135A0A0B4J1H7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv1-135A0A0B4J1H7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.28■■□□□ 1
Igkv1-135A0A0B4J1H7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.28■■□□□ 1
Igkv1-135A0A0B4J1H7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Igkv1-135A0A0B4J1H7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Peli2-204ENSMUST00000226513 1320 ntBASIC21.26■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.25■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv1-135A0A0B4J1H7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.16■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv1-135A0A0B4J1H7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.12■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv1-135A0A0B4J1H7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Amer2-203ENSMUST00000225247 2662 ntBASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gm24804-201ENSMUST00000174982 85 ntBASIC21.05■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv1-135A0A0B4J1H7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv1-135A0A0B4J1H7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv1-135A0A0B4J1H7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-135A0A0B4J1H7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv1-135A0A0B4J1H7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms