Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.18■■□□□ 1.3
Trbc1A0A0A6YWV4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trbc1A0A0A6YWV4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trbc1A0A0A6YWV4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Trbc1A0A0A6YWV4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trbc1A0A0A6YWV4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trbc1A0A0A6YWV4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trbc1A0A0A6YWV4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trbc1A0A0A6YWV4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trbc1A0A0A6YWV4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trbc1A0A0A6YWV4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trbc1A0A0A6YWV4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trbc1A0A0A6YWV4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Trbc1A0A0A6YWV4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.13■■□□□ 1.29
Trbc1A0A0A6YWV4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trbc1A0A0A6YWV4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trbc1A0A0A6YWV4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trbc1A0A0A6YWV4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.11■■□□□ 1.29
Trbc1A0A0A6YWV4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trbc1A0A0A6YWV4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trbc1A0A0A6YWV4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Trbc1A0A0A6YWV4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trbc1A0A0A6YWV4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trbc1A0A0A6YWV4 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.08■■□□□ 1.29
Trbc1A0A0A6YWV4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trbc1A0A0A6YWV4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trbc1A0A0A6YWV4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Trbc1A0A0A6YWV4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Trbc1A0A0A6YWV4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trbc1A0A0A6YWV4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trbc1A0A0A6YWV4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.05■■□□□ 1.28
Trbc1A0A0A6YWV4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Trbc1A0A0A6YWV4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Trbc1A0A0A6YWV4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.05■■□□□ 1.28
Trbc1A0A0A6YWV4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.04■■□□□ 1.28
Trbc1A0A0A6YWV4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trbc1A0A0A6YWV4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trbc1A0A0A6YWV4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trbc1A0A0A6YWV4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trbc1A0A0A6YWV4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.01■■□□□ 1.27
Trbc1A0A0A6YWV4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trbc1A0A0A6YWV4 Gm6206-201ENSMUST00000133472 2199 ntBASIC23■■□□□ 1.27
Trbc1A0A0A6YWV4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trbc1A0A0A6YWV4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trbc1A0A0A6YWV4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.99■■□□□ 1.27
Trbc1A0A0A6YWV4 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.99■■□□□ 1.27
Trbc1A0A0A6YWV4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trbc1A0A0A6YWV4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trbc1A0A0A6YWV4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Trbc1A0A0A6YWV4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trbc1A0A0A6YWV4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trbc1A0A0A6YWV4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trbc1A0A0A6YWV4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trbc1A0A0A6YWV4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Trbc1A0A0A6YWV4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trbc1A0A0A6YWV4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trbc1A0A0A6YWV4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trbc1A0A0A6YWV4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trbc1A0A0A6YWV4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trbc1A0A0A6YWV4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trbc1A0A0A6YWV4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trbc1A0A0A6YWV4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trbc1A0A0A6YWV4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trbc1A0A0A6YWV4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trbc1A0A0A6YWV4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trbc1A0A0A6YWV4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trbc1A0A0A6YWV4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trbc1A0A0A6YWV4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Trbc1A0A0A6YWV4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trbc1A0A0A6YWV4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trbc1A0A0A6YWV4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trbc1A0A0A6YWV4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trbc1A0A0A6YWV4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trbc1A0A0A6YWV4 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.8■■□□□ 1.24
Trbc1A0A0A6YWV4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trbc1A0A0A6YWV4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trbc1A0A0A6YWV4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trbc1A0A0A6YWV4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.78■■□□□ 1.24
Trbc1A0A0A6YWV4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trbc1A0A0A6YWV4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trbc1A0A0A6YWV4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trbc1A0A0A6YWV4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Trbc1A0A0A6YWV4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trbc1A0A0A6YWV4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Trbc1A0A0A6YWV4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.76■■□□□ 1.23
Trbc1A0A0A6YWV4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trbc1A0A0A6YWV4 Gm9397-201ENSMUST00000200125 605 ntBASIC22.76■■□□□ 1.23
Trbc1A0A0A6YWV4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trbc1A0A0A6YWV4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Trbc1A0A0A6YWV4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.75■■□□□ 1.23
Trbc1A0A0A6YWV4 Gm45855-201ENSMUST00000212546 880 ntBASIC22.75■■□□□ 1.23
Trbc1A0A0A6YWV4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trbc1A0A0A6YWV4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trbc1A0A0A6YWV4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.73■■□□□ 1.23
Trbc1A0A0A6YWV4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trbc1A0A0A6YWV4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trbc1A0A0A6YWV4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Trbc1A0A0A6YWV4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trbc1A0A0A6YWV4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Trbc1A0A0A6YWV4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms