Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13-1A0A075B644 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav13-1A0A075B644 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13-1A0A075B644 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav13-1A0A075B644 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav13-1A0A075B644 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Trav13-1A0A075B644 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav13-1A0A075B644 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13-1A0A075B644 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13-1A0A075B644 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-1A0A075B644 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-1A0A075B644 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-1A0A075B644 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-1A0A075B644 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13-1A0A075B644 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trav13-1A0A075B644 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav13-1A0A075B644 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav13-1A0A075B644 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13-1A0A075B644 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13-1A0A075B644 Gm9397-201ENSMUST00000200125 605 ntBASIC17.72■□□□□ 0.43
Trav13-1A0A075B644 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav13-1A0A075B644 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav13-1A0A075B644 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13-1A0A075B644 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav13-1A0A075B644 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.71■□□□□ 0.43
Trav13-1A0A075B644 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Trav13-1A0A075B644 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav13-1A0A075B644 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav13-1A0A075B644 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav13-1A0A075B644 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.69■□□□□ 0.42
Trav13-1A0A075B644 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav13-1A0A075B644 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav13-1A0A075B644 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-1A0A075B644 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13-1A0A075B644 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav13-1A0A075B644 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav13-1A0A075B644 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13-1A0A075B644 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav13-1A0A075B644 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav13-1A0A075B644 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13-1A0A075B644 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13-1A0A075B644 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13-1A0A075B644 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13-1A0A075B644 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav13-1A0A075B644 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-1A0A075B644 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-1A0A075B644 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-1A0A075B644 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.61■□□□□ 0.41
Trav13-1A0A075B644 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav13-1A0A075B644 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13-1A0A075B644 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav13-1A0A075B644 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-1A0A075B644 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trav13-1A0A075B644 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-1A0A075B644 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav13-1A0A075B644 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-1A0A075B644 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Trav13-1A0A075B644 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13-1A0A075B644 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-1A0A075B644 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-1A0A075B644 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-1A0A075B644 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-1A0A075B644 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav13-1A0A075B644 Gm24970-201ENSMUST00000175582 82 ntBASIC17.55■□□□□ 0.4
Trav13-1A0A075B644 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13-1A0A075B644 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13-1A0A075B644 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav13-1A0A075B644 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav13-1A0A075B644 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13-1A0A075B644 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13-1A0A075B644 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13-1A0A075B644 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13-1A0A075B644 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav13-1A0A075B644 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13-1A0A075B644 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13-1A0A075B644 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-1A0A075B644 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-1A0A075B644 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13-1A0A075B644 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13-1A0A075B644 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Trav13-1A0A075B644 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13-1A0A075B644 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13-1A0A075B644 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.47■□□□□ 0.39
Trav13-1A0A075B644 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13-1A0A075B644 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trav13-1A0A075B644 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13-1A0A075B644 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav13-1A0A075B644 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13-1A0A075B644 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13-1A0A075B644 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms