Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-6A0A075B603 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-6A0A075B603 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-6A0A075B603 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav6-6A0A075B603 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-6A0A075B603 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-6A0A075B603 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-6A0A075B603 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav6-6A0A075B603 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-6A0A075B603 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-6A0A075B603 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-6A0A075B603 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav6-6A0A075B603 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-6A0A075B603 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-6A0A075B603 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-6A0A075B603 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-6A0A075B603 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav6-6A0A075B603 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-6A0A075B603 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-6A0A075B603 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-6A0A075B603 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Trav6-6A0A075B603 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-6A0A075B603 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-6A0A075B603 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav6-6A0A075B603 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6-6A0A075B603 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-6A0A075B603 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav6-6A0A075B603 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6-6A0A075B603 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav6-6A0A075B603 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6-6A0A075B603 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.53■□□□□ 0.56
Trav6-6A0A075B603 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.52■□□□□ 0.55
Trav6-6A0A075B603 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-6A0A075B603 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-6A0A075B603 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.51■□□□□ 0.55
Trav6-6A0A075B603 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6-6A0A075B603 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trav6-6A0A075B603 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6-6A0A075B603 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6-6A0A075B603 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6-6A0A075B603 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trav6-6A0A075B603 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6-6A0A075B603 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-6A0A075B603 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-6A0A075B603 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6-6A0A075B603 Gm27322-201ENSMUST00000184007 104 ntBASIC18.45■□□□□ 0.54
Trav6-6A0A075B603 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6-6A0A075B603 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav6-6A0A075B603 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trav6-6A0A075B603 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav6-6A0A075B603 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-6A0A075B603 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.42■□□□□ 0.54
Trav6-6A0A075B603 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-6A0A075B603 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-6A0A075B603 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trav6-6A0A075B603 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-6A0A075B603 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-6A0A075B603 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Trav6-6A0A075B603 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-6A0A075B603 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-6A0A075B603 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav6-6A0A075B603 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-6A0A075B603 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav6-6A0A075B603 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.37■□□□□ 0.53
Trav6-6A0A075B603 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-6A0A075B603 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav6-6A0A075B603 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Trav6-6A0A075B603 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-6A0A075B603 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-6A0A075B603 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-6A0A075B603 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav6-6A0A075B603 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-6A0A075B603 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-6A0A075B603 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-6A0A075B603 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-6A0A075B603 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav6-6A0A075B603 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-6A0A075B603 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-6A0A075B603 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav6-6A0A075B603 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-6A0A075B603 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-6A0A075B603 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-6A0A075B603 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav6-6A0A075B603 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-6A0A075B603 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-6A0A075B603 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-6A0A075B603 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-6A0A075B603 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-6A0A075B603 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-6A0A075B603 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-6A0A075B603 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-6A0A075B603 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-6A0A075B603 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms