Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH1Q9Y2L9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRCH1Q9Y2L9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 AC025884.2-201ENST00000553429 711 ntBASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
LRCH1Q9Y2L9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH1Q9Y2L9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH1Q9Y2L9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH1Q9Y2L9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH1Q9Y2L9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH1Q9Y2L9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRCH1Q9Y2L9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 U85056.1-201ENST00000616429 682 ntBASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 AL022069.1-201ENST00000568025 1636 ntBASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 AC087289.5-201ENST00000586076 3175 ntBASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRCH1Q9Y2L9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms