Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC32.62■■■□□ 2.81
SHANK2Q9UPX8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SHANK2Q9UPX8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 DUSP8P5-201ENST00000422884 1815 ntBASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 AC011767.1-201ENST00000617410 1153 ntBASIC32.61■■■□□ 2.81
SHANK2Q9UPX8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
SHANK2Q9UPX8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 AC079089.2-201ENST00000531211 1277 ntBASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 AL050303.2-201ENST00000619798 666 ntBASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SHANK2Q9UPX8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 AC006970.2-201ENST00000450065 779 ntBASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
SHANK2Q9UPX8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
SHANK2Q9UPX8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 AL355802.2-201ENST00000402069 882 ntBASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 NCF1B-203ENST00000435988 1254 ntBASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.57■■■□□ 2.8
SHANK2Q9UPX8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SHANK2Q9UPX8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC32.56■■■□□ 2.8
SHANK2Q9UPX8 MAP2K4P1-201ENST00000438453 1195 ntBASIC32.56■■■□□ 2.8
SHANK2Q9UPX8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SHANK2Q9UPX8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SHANK2Q9UPX8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.55■■■□□ 2.8
SHANK2Q9UPX8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
SHANK2Q9UPX8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SHANK2Q9UPX8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 AC010141.2-201ENST00000452426 721 ntBASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 MYCNOS-205ENST00000641950 531 ntBASIC32.54■■■□□ 2.8
SHANK2Q9UPX8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SHANK2Q9UPX8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SHANK2Q9UPX8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC32.53■■■□□ 2.8
SHANK2Q9UPX8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.53■■■□□ 2.8
SHANK2Q9UPX8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC32.53■■■□□ 2.8
SHANK2Q9UPX8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SHANK2Q9UPX8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
SHANK2Q9UPX8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
SHANK2Q9UPX8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC32.52■■■□□ 2.8
SHANK2Q9UPX8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.52■■■□□ 2.8
SHANK2Q9UPX8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC32.51■■■□□ 2.8
SHANK2Q9UPX8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 GUSBP6-202ENST00000438529 1198 ntBASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SHANK2Q9UPX8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SHANK2Q9UPX8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SHANK2Q9UPX8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC32.5■■■□□ 2.79
SHANK2Q9UPX8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.5■■■□□ 2.79
SHANK2Q9UPX8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SHANK2Q9UPX8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 UQCRFS1P1-201ENST00000435169 820 ntBASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 DUX4L16-201ENST00000555130 1264 ntBASIC32.49■■■□□ 2.79
SHANK2Q9UPX8 MDK-213ENST00000617138 635 ntTSL 2 BASIC32.49■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms