Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 AC131212.1-201ENST00000613771 668 ntBASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.03■■□□□ 1.12
LRRC40Q9H9A6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 AC079089.2-201ENST00000531211 1277 ntBASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 AC087239.1-201ENST00000622671 572 ntBASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRC40Q9H9A6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 AC010525.1-201ENST00000585559 441 ntBASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRC40Q9H9A6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
LRRC40Q9H9A6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRRC40Q9H9A6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22■■□□□ 1.11
LRRC40Q9H9A6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22■■□□□ 1.11
LRRC40Q9H9A6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRRC40Q9H9A6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC40Q9H9A6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC40Q9H9A6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRRC40Q9H9A6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 AC010141.3-201ENST00000456659 717 ntBASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC40Q9H9A6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC40Q9H9A6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms