Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.09■■□□□ 1.29
NSUN3Q9H649 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.09■■□□□ 1.29
NSUN3Q9H649 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.09■■□□□ 1.29
NSUN3Q9H649 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NSUN3Q9H649 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NSUN3Q9H649 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.08■■□□□ 1.29
NSUN3Q9H649 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NSUN3Q9H649 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
NSUN3Q9H649 POU5F1P3-201ENST00000428824 1078 ntBASIC23.08■■□□□ 1.29
NSUN3Q9H649 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NSUN3Q9H649 AC105036.2-201ENST00000569468 176 ntBASIC23.08■■□□□ 1.29
NSUN3Q9H649 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NSUN3Q9H649 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NSUN3Q9H649 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
NSUN3Q9H649 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
NSUN3Q9H649 AC009237.3-201ENST00000393279 1427 ntBASIC23.08■■□□□ 1.28
NSUN3Q9H649 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.07■■□□□ 1.28
NSUN3Q9H649 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.07■■□□□ 1.28
NSUN3Q9H649 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NSUN3Q9H649 AC133552.2-202ENST00000575694 574 ntBASIC23.07■■□□□ 1.28
NSUN3Q9H649 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
NSUN3Q9H649 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
NSUN3Q9H649 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
NSUN3Q9H649 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
NSUN3Q9H649 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NSUN3Q9H649 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.06■■□□□ 1.28
NSUN3Q9H649 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NSUN3Q9H649 AP001160.3-201ENST00000601484 763 ntBASIC23.06■■□□□ 1.28
NSUN3Q9H649 ITM2C-210ENST00000620962 501 ntBASIC23.06■■□□□ 1.28
NSUN3Q9H649 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NSUN3Q9H649 AL139125.2-201ENST00000623134 1869 ntBASIC23.06■■□□□ 1.28
NSUN3Q9H649 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.06■■□□□ 1.28
NSUN3Q9H649 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NSUN3Q9H649 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NSUN3Q9H649 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NSUN3Q9H649 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.06■■□□□ 1.28
NSUN3Q9H649 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 AC093323.1-202ENST00000635031 2045 ntBASIC23.05■■□□□ 1.28
NSUN3Q9H649 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 AC098934.4-201ENST00000564127 592 ntBASIC23.05■■□□□ 1.28
NSUN3Q9H649 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NSUN3Q9H649 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
NSUN3Q9H649 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 KRT18P29-201ENST00000397031 1267 ntBASIC23.04■■□□□ 1.28
NSUN3Q9H649 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 CNN2P6-201ENST00000439038 900 ntBASIC23.04■■□□□ 1.28
NSUN3Q9H649 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
NSUN3Q9H649 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NSUN3Q9H649 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NSUN3Q9H649 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NSUN3Q9H649 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
NSUN3Q9H649 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NSUN3Q9H649 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.02■■□□□ 1.28
NSUN3Q9H649 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
NSUN3Q9H649 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
NSUN3Q9H649 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms