Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 AC099791.1-201ENST00000416440 715 ntBASIC19.27■□□□□ 0.68
NELFAQ9H3P2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 AC142381.2-201ENST00000566120 298 ntBASIC19.27■□□□□ 0.68
NELFAQ9H3P2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NELFAQ9H3P2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NELFAQ9H3P2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NELFAQ9H3P2 LINC00526-201ENST00000581067 1875 ntBASIC19.26■□□□□ 0.67
NELFAQ9H3P2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 AC091305.1-201ENST00000479476 895 ntBASIC19.26■□□□□ 0.67
NELFAQ9H3P2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 AL031602.1-201ENST00000633169 911 ntBASIC19.26■□□□□ 0.67
NELFAQ9H3P2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 AC080038.3-201ENST00000623346 1952 ntBASIC19.26■□□□□ 0.67
NELFAQ9H3P2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NELFAQ9H3P2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 RASA4CP-201ENST00000424092 1398 ntBASIC19.25■□□□□ 0.67
NELFAQ9H3P2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 CA15P2-201ENST00000611168 834 ntBASIC19.25■□□□□ 0.67
NELFAQ9H3P2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 PKD1P6-201ENST00000343738 4769 ntBASIC19.25■□□□□ 0.67
NELFAQ9H3P2 EP400NL-214ENST00000641289 2402 ntBASIC19.25■□□□□ 0.67
NELFAQ9H3P2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NELFAQ9H3P2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 AC068587.7-201ENST00000641602 218 ntBASIC19.24■□□□□ 0.67
NELFAQ9H3P2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFAQ9H3P2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 AC137767.1-201ENST00000602918 1920 ntBASIC19.23■□□□□ 0.67
NELFAQ9H3P2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 AC139530.1-201ENST00000575312 1977 ntBASIC19.23■□□□□ 0.67
NELFAQ9H3P2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NELFAQ9H3P2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFAQ9H3P2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms