Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.05■□□□□ 0.64
Lrrc40Q9CRC8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lrrc40Q9CRC8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lrrc40Q9CRC8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Smad6-203ENSMUST00000179458 273 ntBASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Lrrc40Q9CRC8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Lrrc40Q9CRC8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lrrc40Q9CRC8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lrrc40Q9CRC8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Gm11421-201ENSMUST00000122124 294 ntBASIC19■□□□□ 0.63
Lrrc40Q9CRC8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Gm43173-201ENSMUST00000202246 593 ntBASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrrc40Q9CRC8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrc40Q9CRC8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrc40Q9CRC8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrc40Q9CRC8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrrc40Q9CRC8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms