Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDC1Q9BTX1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
NDC1Q9BTX1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NDC1Q9BTX1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDC1Q9BTX1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 CCDC92B-201ENST00000575506 885 ntBASIC20.67■□□□□ 0.9
NDC1Q9BTX1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.67■□□□□ 0.9
NDC1Q9BTX1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 SMUG1P1-201ENST00000590640 811 ntBASIC20.66■□□□□ 0.9
NDC1Q9BTX1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 BX005040.4-201ENST00000637145 1518 ntBASIC20.66■□□□□ 0.9
NDC1Q9BTX1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDC1Q9BTX1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L2-201ENST00000561772 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L6-201ENST00000626483 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L1-201ENST00000627662 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L8-201ENST00000629013 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L3-201ENST00000630187 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L7-201ENST00000630678 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 DUX4L5-201ENST00000630834 1275 ntBASIC20.65■□□□□ 0.9
NDC1Q9BTX1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDC1Q9BTX1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
NDC1Q9BTX1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NDC1Q9BTX1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 KRT18P14-201ENST00000534205 1250 ntBASIC20.64■□□□□ 0.89
NDC1Q9BTX1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 TERF1P2-201ENST00000583350 1212 ntBASIC20.64■□□□□ 0.89
NDC1Q9BTX1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NDC1Q9BTX1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDC1Q9BTX1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.62■□□□□ 0.89
NDC1Q9BTX1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.61■□□□□ 0.89
NDC1Q9BTX1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NDC1Q9BTX1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms