Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC245100.8-202ENST00000629247 1058 ntBASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.39■□□□□ 0.7
FOXN4Q96NZ1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
FOXN4Q96NZ1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 FBXW4P1-201ENST00000426721 2239 ntBASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 PBX2P1-201ENST00000493219 1291 ntBASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 AC133637.1-201ENST00000624115 1537 ntBASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN4Q96NZ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 AC133561.4-201ENST00000566112 224 ntBASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.38■□□□□ 0.69
FOXN4Q96NZ1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 AC007375.3-201ENST00000600936 2314 ntBASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN4Q96NZ1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN4Q96NZ1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN4Q96NZ1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN4Q96NZ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXN4Q96NZ1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN4Q96NZ1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 UNC93B3-201ENST00000308076 687 ntBASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 AC106739.1-201ENST00000617035 715 ntBASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN4Q96NZ1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 MIR3181-201ENST00000578512 73 ntBASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXN4Q96NZ1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
FOXN4Q96NZ1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN4Q96NZ1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN4Q96NZ1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXN4Q96NZ1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms