Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CASKIN1Q8WXD9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CASKIN1Q8WXD9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.05
CASKIN1Q8WXD9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
CASKIN1Q8WXD9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC34.06■■■■□ 3.04
CASKIN1Q8WXD9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CASKIN1Q8WXD9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 MIR663A-201ENST00000385250 93 ntBASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 AC011767.1-201ENST00000617410 1153 ntBASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC34.04■■■■□ 3.04
CASKIN1Q8WXD9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 AC104771.1-201ENST00000603335 964 ntBASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 GXYLT1P5-201ENST00000614548 1189 ntBASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
CASKIN1Q8WXD9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 UBE2DNL-204ENST00000602536 740 ntBASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC34.02■■■■□ 3.04
CASKIN1Q8WXD9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC34.01■■■■□ 3.04
CASKIN1Q8WXD9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.04
CASKIN1Q8WXD9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC34.01■■■■□ 3.03
CASKIN1Q8WXD9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
CASKIN1Q8WXD9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 MAP2K4P1-201ENST00000438453 1195 ntBASIC34■■■■□ 3.03
CASKIN1Q8WXD9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC34■■■■□ 3.03
CASKIN1Q8WXD9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC33.99■■■■□ 3.03
CASKIN1Q8WXD9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 LINC00526-201ENST00000581067 1875 ntBASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC33.98■■■■□ 3.03
CASKIN1Q8WXD9 AL050303.2-201ENST00000619798 666 ntBASIC33.97■■■■□ 3.03
CASKIN1Q8WXD9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC33.97■■■■□ 3.03
CASKIN1Q8WXD9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
CASKIN1Q8WXD9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
CASKIN1Q8WXD9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.97■■■■□ 3.03
CASKIN1Q8WXD9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 NCF1B-203ENST00000435988 1254 ntBASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC33.96■■■■□ 3.03
CASKIN1Q8WXD9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
CASKIN1Q8WXD9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC33.95■■■■□ 3.03
CASKIN1Q8WXD9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
CASKIN1Q8WXD9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC33.95■■■■□ 3.02
CASKIN1Q8WXD9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
CASKIN1Q8WXD9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CASKIN1Q8WXD9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC33.94■■■■□ 3.02
CASKIN1Q8WXD9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CASKIN1Q8WXD9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms