Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 AL117328.2-201ENST00000624617 1940 ntBASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH20Q8N6Y1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 YBX1P1-201ENST00000445822 960 ntBASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 MIR6084-201ENST00000622012 110 ntBASIC22.11■■□□□ 1.13
PCDH20Q8N6Y1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDH20Q8N6Y1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 MIR5787-201ENST00000611784 55 ntBASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH20Q8N6Y1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 AC123595.1-201ENST00000440769 1046 ntBASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH20Q8N6Y1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH20Q8N6Y1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDH20Q8N6Y1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PCDH20Q8N6Y1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH20Q8N6Y1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 AC233723.2-201ENST00000623798 2106 ntBASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 SMUG1P1-201ENST00000590640 811 ntBASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 AC087623.3-201ENST00000607047 1098 ntBASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 EP400NL-214ENST00000641289 2402 ntBASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH20Q8N6Y1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms