Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 KRT87P-202ENST00000534226 1464 ntBASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 MFSD11-216ENST00000590393 1141 ntBASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 AL121832.2-201ENST00000610979 668 ntBASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 AL353803.4-201ENST00000565882 1934 ntBASIC22.12■■□□□ 1.13
SYNPOQ8N3V7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYNPOQ8N3V7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 CD99P1-205ENST00000527459 561 ntBASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 AC005224.4-201ENST00000583262 1652 ntBASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYNPOQ8N3V7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYNPOQ8N3V7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SYNPOQ8N3V7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SYNPOQ8N3V7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SYNPOQ8N3V7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.08■■□□□ 1.13
SYNPOQ8N3V7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SYNPOQ8N3V7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SYNPOQ8N3V7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 AC083906.2-201ENST00000511578 360 ntBASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 AC104187.1-201ENST00000607510 612 ntBASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYNPOQ8N3V7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 AC007322.1-201ENST00000426983 750 ntBASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 TSPY6P-201ENST00000448518 926 ntBASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SYNPOQ8N3V7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 DUX4L16-201ENST00000555130 1264 ntBASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.05■■□□□ 1.12
SYNPOQ8N3V7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms