Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC71Q8IV32 SLC25A24-204ENST00000569674 2357 ntBASIC20.28■□□□□ 0.84
CCDC71Q8IV32 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC71Q8IV32 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC71Q8IV32 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC71Q8IV32 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC71Q8IV32 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC71Q8IV32 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.26■□□□□ 0.83
CCDC71Q8IV32 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 AC009102.2-201ENST00000606772 1639 ntBASIC20.26■□□□□ 0.83
CCDC71Q8IV32 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC71Q8IV32 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 AC091305.1-201ENST00000479476 895 ntBASIC20.25■□□□□ 0.83
CCDC71Q8IV32 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 MIR5787-201ENST00000611784 55 ntBASIC20.25■□□□□ 0.83
CCDC71Q8IV32 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC71Q8IV32 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC71Q8IV32 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 CA15P2-201ENST00000611168 834 ntBASIC20.23■□□□□ 0.83
CCDC71Q8IV32 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC71Q8IV32 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 AC008764.7-201ENST00000593779 1081 ntBASIC20.22■□□□□ 0.83
CCDC71Q8IV32 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCDC71Q8IV32 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC71Q8IV32 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms