Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS36Q86VN1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 AC007375.3-201ENST00000600936 2314 ntBASIC23.31■■□□□ 1.32
VPS36Q86VN1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
VPS36Q86VN1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.3■■□□□ 1.32
VPS36Q86VN1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS36Q86VN1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS36Q86VN1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS36Q86VN1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS36Q86VN1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS36Q86VN1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.29■■□□□ 1.32
VPS36Q86VN1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VPS36Q86VN1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS36Q86VN1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS36Q86VN1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS36Q86VN1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS36Q86VN1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS36Q86VN1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
VPS36Q86VN1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS36Q86VN1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS36Q86VN1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS36Q86VN1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
VPS36Q86VN1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
VPS36Q86VN1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.27■■□□□ 1.31
VPS36Q86VN1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
VPS36Q86VN1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS36Q86VN1 AL356740.2-201ENST00000601559 647 ntBASIC23.26■■□□□ 1.31
VPS36Q86VN1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS36Q86VN1 AC133637.1-201ENST00000624115 1537 ntBASIC23.26■■□□□ 1.31
VPS36Q86VN1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS36Q86VN1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS36Q86VN1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
VPS36Q86VN1 AC010542.4-201ENST00000563151 1910 ntBASIC23.25■■□□□ 1.31
VPS36Q86VN1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.25■■□□□ 1.31
VPS36Q86VN1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.25■■□□□ 1.31
VPS36Q86VN1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS36Q86VN1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.25■■□□□ 1.31
VPS36Q86VN1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS36Q86VN1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS36Q86VN1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
VPS36Q86VN1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS36Q86VN1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS36Q86VN1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS36Q86VN1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS36Q86VN1 pRNA.6-201ENST00000610482 90 ntBASIC23.23■■□□□ 1.31
VPS36Q86VN1 pRNA.5-201ENST00000612139 90 ntBASIC23.23■■□□□ 1.31
VPS36Q86VN1 pRNA.11-201ENST00000618423 90 ntBASIC23.23■■□□□ 1.31
VPS36Q86VN1 pRNA.13-201ENST00000619112 90 ntBASIC23.23■■□□□ 1.31
VPS36Q86VN1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
VPS36Q86VN1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms