Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 RIM11YMR139W 1113 nt3.84□□□□□ -1.79
VTI1Q04338 OPY1YBR129C 987 nt3.84□□□□□ -1.79
VTI1Q04338 YBR242WYBR242W 717 nt3.84□□□□□ -1.79
VTI1Q04338 PHO5YBR093C 1404 nt3.84□□□□□ -1.79
VTI1Q04338 TPD3YAL016W 1908 nt3.83□□□□□ -1.8
VTI1Q04338 RSF2YJR127C 4143 nt3.83□□□□□ -1.8
VTI1Q04338 SLA1YBL007C 3735 nt3.83□□□□□ -1.8
VTI1Q04338 YGR126WYGR126W 693 nt3.83□□□□□ -1.8
VTI1Q04338 RRG9YNL213C 645 nt3.83□□□□□ -1.8
VTI1Q04338 RPC34YNR003C 954 nt3.83□□□□□ -1.8
VTI1Q04338 MCM16YPR046W 546 nt3.83□□□□□ -1.8
VTI1Q04338 AGA1YNR044W 2178 nt3.83□□□□□ -1.8
VTI1Q04338 SEA4YBL104C 3117 nt3.83□□□□□ -1.8
VTI1Q04338 STE14YDR410C 720 nt3.82□□□□□ -1.8
VTI1Q04338 tL(UAG)JtL(UAG)J 82 nt3.82□□□□□ -1.8
VTI1Q04338 tL(UAG)L1tL(UAG)L1 82 nt3.82□□□□□ -1.8
VTI1Q04338 tL(UAG)L2tL(UAG)L2 82 nt3.82□□□□□ -1.8
VTI1Q04338 YIM2YMR151W 438 nt3.82□□□□□ -1.8
VTI1Q04338 DER1YBR201W 636 nt3.82□□□□□ -1.8
VTI1Q04338 MTR4YJL050W 3222 nt3.82□□□□□ -1.8
VTI1Q04338 ALA1YOR335C 2877 nt3.82□□□□□ -1.8
VTI1Q04338 SQS1YNL224C 2304 nt3.82□□□□□ -1.8
VTI1Q04338 DSL1YNL258C 2265 nt3.82□□□□□ -1.8
VTI1Q04338 MSD1YPL104W 1977 nt3.82□□□□□ -1.8
VTI1Q04338 YHR202WYHR202W 1809 nt3.81□□□□□ -1.8
VTI1Q04338 YOL019WYOL019W 1656 nt3.81□□□□□ -1.8
VTI1Q04338 YFL040WYFL040W 1623 nt3.81□□□□□ -1.8
VTI1Q04338 RRN6YBL014C 2685 nt3.81□□□□□ -1.8
VTI1Q04338 RMD1YDL001W 1293 nt3.81□□□□□ -1.8
VTI1Q04338 UBC8YEL012W 657 nt3.81□□□□□ -1.8
VTI1Q04338 YEL074WYEL074W 339 nt3.81□□□□□ -1.8
VTI1Q04338 tV(CAC)DtV(CAC)D 73 nt3.81□□□□□ -1.8
VTI1Q04338 tV(CAC)HtV(CAC)H 73 nt3.81□□□□□ -1.8
VTI1Q04338 PPA2YMR267W 933 nt3.81□□□□□ -1.8
VTI1Q04338 AIM39YOL053W 1188 nt3.81□□□□□ -1.8
VTI1Q04338 PEX11YOL147C 711 nt3.81□□□□□ -1.8
VTI1Q04338 CPA2YJR109C 3357 nt3.81□□□□□ -1.8
VTI1Q04338 XRS2YDR369C 2565 nt3.8□□□□□ -1.8
VTI1Q04338 PDS1YDR113C 1122 nt3.8□□□□□ -1.8
VTI1Q04338 MMS21YEL019C 804 nt3.8□□□□□ -1.8
VTI1Q04338 YER147C-AYER147C-A 411 nt3.8□□□□□ -1.8
VTI1Q04338 TOS8YGL096W 831 nt3.8□□□□□ -1.8
VTI1Q04338 VAM10YOR068C 345 nt3.8□□□□□ -1.8
VTI1Q04338 RRP36YOR287C 903 nt3.8□□□□□ -1.8
VTI1Q04338 YPL071CYPL071C 471 nt3.8□□□□□ -1.8
VTI1Q04338 YPL168WYPL168W 1293 nt3.8□□□□□ -1.8
VTI1Q04338 DSN1YIR010W 1731 nt3.8□□□□□ -1.8
VTI1Q04338 CCM1YGR150C 2595 nt3.8□□□□□ -1.8
VTI1Q04338 STP1YDR463W 1560 nt3.8□□□□□ -1.8
VTI1Q04338 MPC54YOR177C 1395 nt3.79□□□□□ -1.8
VTI1Q04338 MIG3YER028C 1185 nt3.79□□□□□ -1.8
VTI1Q04338 RPS8BYER102W 603 nt3.79□□□□□ -1.8
VTI1Q04338 BET1YIL004C 429 nt3.79□□□□□ -1.8
VTI1Q04338 ANB1YJR047C 474 nt3.79□□□□□ -1.8
VTI1Q04338 BUR2YLR226W 1188 nt3.79□□□□□ -1.8
VTI1Q04338 TVP18YMR071C 504 nt3.79□□□□□ -1.8
VTI1Q04338 RPS8AYBL072C 603 nt3.79□□□□□ -1.8
VTI1Q04338 YDR089WYDR089W 2610 nt3.78□□□□□ -1.8
VTI1Q04338 FRQ1YDR373W 573 nt3.78□□□□□ -1.8
VTI1Q04338 SFH5YJL145W 885 nt3.78□□□□□ -1.8
VTI1Q04338 FLD1YLR404W 858 nt3.78□□□□□ -1.8
VTI1Q04338 SHH3YMR118C 591 nt3.78□□□□□ -1.8
VTI1Q04338 MOH1YBL049W 417 nt3.78□□□□□ -1.8
VTI1Q04338 YOR238WYOR238W 912 nt3.78□□□□□ -1.8
VTI1Q04338 DGA1YOR245C 1257 nt3.78□□□□□ -1.8
VTI1Q04338 DSE3YOR264W 1293 nt3.78□□□□□ -1.8
VTI1Q04338 MIG1YGL035C 1515 nt3.78□□□□□ -1.8
VTI1Q04338 NUP159YIL115C 4383 nt3.77□□□□□ -1.81
VTI1Q04338 CTK1YKL139W 1587 nt3.77□□□□□ -1.81
VTI1Q04338 MEF1YLR069C 2286 nt3.77□□□□□ -1.81
VTI1Q04338 YHR173CYHR173C 339 nt3.77□□□□□ -1.81
VTI1Q04338 ARG2YJL071W 1725 nt3.77□□□□□ -1.81
VTI1Q04338 AEP2YMR282C 1743 nt3.77□□□□□ -1.81
VTI1Q04338 YHL012WYHL012W 1482 nt3.77□□□□□ -1.81
VTI1Q04338 SPT10YJL127C 1923 nt3.77□□□□□ -1.81
VTI1Q04338 TGL1YKL140W 1647 nt3.77□□□□□ -1.81
VTI1Q04338 NTA1YJR062C 1374 nt3.76□□□□□ -1.81
VTI1Q04338 RTT109YLL002W 1311 nt3.76□□□□□ -1.81
VTI1Q04338 CUS1YMR240C 1311 nt3.76□□□□□ -1.81
VTI1Q04338 YDR431WYDR431W 312 nt3.76□□□□□ -1.81
VTI1Q04338 YKE4YIL023C 1041 nt3.76□□□□□ -1.81
VTI1Q04338 PET130YJL023C 1044 nt3.76□□□□□ -1.81
VTI1Q04338 SPC3YLR066W 555 nt3.76□□□□□ -1.81
VTI1Q04338 MFA2YNL145W 117 nt3.76□□□□□ -1.81
VTI1Q04338 YBL081WYBL081W 1107 nt3.76□□□□□ -1.81
VTI1Q04338 CPR8YNR028W 927 nt3.76□□□□□ -1.81
VTI1Q04338 YPR108W-AYPR108W-A 213 nt3.76□□□□□ -1.81
VTI1Q04338 ATP25YMR098C 1839 nt3.76□□□□□ -1.81
VTI1Q04338 LTV1YKL143W 1392 nt3.76□□□□□ -1.81
VTI1Q04338 TRE2YOR256C 2430 nt3.75□□□□□ -1.81
VTI1Q04338 YJR030CYJR030C 2238 nt3.75□□□□□ -1.81
VTI1Q04338 SNT1YCR033W 3681 nt3.75□□□□□ -1.81
VTI1Q04338 PEX10YDR265W 1014 nt3.75□□□□□ -1.81
VTI1Q04338 YKT6YKL196C 603 nt3.75□□□□□ -1.81
VTI1Q04338 AIM41YOR215C 558 nt3.75□□□□□ -1.81
VTI1Q04338 HER2YMR293C 1395 nt3.75□□□□□ -1.81
VTI1Q04338 MIF2YKL089W 1650 nt3.75□□□□□ -1.81
VTI1Q04338 PHO81YGR233C 3537 nt3.74□□□□□ -1.81
VTI1Q04338 ACK1YDL203C 1872 nt3.74□□□□□ -1.81
VTI1Q04338 PEX21YGR239C 867 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms