Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRISP3P54108 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CRISP3P54108 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CRISP3P54108 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CRISP3P54108 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.27■□□□□ 0.83
CRISP3P54108 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.27■□□□□ 0.83
CRISP3P54108 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CRISP3P54108 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.26■□□□□ 0.83
CRISP3P54108 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRISP3P54108 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CRISP3P54108 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.26■□□□□ 0.83
CRISP3P54108 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRISP3P54108 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRISP3P54108 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
CRISP3P54108 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.26■□□□□ 0.83
CRISP3P54108 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CRISP3P54108 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CRISP3P54108 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.26■□□□□ 0.83
CRISP3P54108 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.26■□□□□ 0.83
CRISP3P54108 MIR3621-201ENST00000580529 85 ntBASIC20.26■□□□□ 0.83
CRISP3P54108 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.26■□□□□ 0.83
CRISP3P54108 AC133637.1-201ENST00000624115 1537 ntBASIC20.26■□□□□ 0.83
CRISP3P54108 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CRISP3P54108 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CRISP3P54108 pRNA.6-201ENST00000610482 90 ntBASIC20.25■□□□□ 0.83
CRISP3P54108 pRNA.5-201ENST00000612139 90 ntBASIC20.25■□□□□ 0.83
CRISP3P54108 pRNA.11-201ENST00000618423 90 ntBASIC20.25■□□□□ 0.83
CRISP3P54108 pRNA.13-201ENST00000619112 90 ntBASIC20.25■□□□□ 0.83
CRISP3P54108 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.25■□□□□ 0.83
CRISP3P54108 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.25■□□□□ 0.83
CRISP3P54108 FBXW4P1-201ENST00000426721 2239 ntBASIC20.25■□□□□ 0.83
CRISP3P54108 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRISP3P54108 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRISP3P54108 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRISP3P54108 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CRISP3P54108 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRISP3P54108 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.24■□□□□ 0.83
CRISP3P54108 AC099791.2-201ENST00000605725 427 ntBASIC20.24■□□□□ 0.83
CRISP3P54108 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CRISP3P54108 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
CRISP3P54108 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CRISP3P54108 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CRISP3P54108 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.23■□□□□ 0.83
CRISP3P54108 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRISP3P54108 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRISP3P54108 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CRISP3P54108 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CRISP3P54108 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
CRISP3P54108 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.23■□□□□ 0.83
CRISP3P54108 AC006455.2-201ENST00000429931 906 ntBASIC20.23■□□□□ 0.83
CRISP3P54108 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.23■□□□□ 0.83
CRISP3P54108 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.23■□□□□ 0.83
CRISP3P54108 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CRISP3P54108 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.22■□□□□ 0.83
CRISP3P54108 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.22■□□□□ 0.83
CRISP3P54108 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.22■□□□□ 0.83
CRISP3P54108 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.22■□□□□ 0.83
CRISP3P54108 AC092171.4-201ENST00000609130 632 ntBASIC20.22■□□□□ 0.83
CRISP3P54108 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CRISP3P54108 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRISP3P54108 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 SRD5A1P1-201ENST00000442297 786 ntBASIC20.21■□□□□ 0.83
CRISP3P54108 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.21■□□□□ 0.83
CRISP3P54108 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.21■□□□□ 0.83
CRISP3P54108 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRISP3P54108 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CRISP3P54108 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRISP3P54108 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.2■□□□□ 0.82
CRISP3P54108 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CRISP3P54108 AL031602.1-201ENST00000633169 911 ntBASIC20.2■□□□□ 0.82
CRISP3P54108 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRISP3P54108 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms