Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.14■□□□□ 0.65
SRP9P49458 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.14■□□□□ 0.65
SRP9P49458 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SRP9P49458 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SRP9P49458 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.13■□□□□ 0.65
SRP9P49458 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
SRP9P49458 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.13■□□□□ 0.65
SRP9P49458 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SRP9P49458 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
SRP9P49458 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 AC005229.4-201ENST00000610085 2198 ntBASIC19.13■□□□□ 0.65
SRP9P49458 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRP9P49458 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
SRP9P49458 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SRP9P49458 AC009102.2-201ENST00000606772 1639 ntBASIC19.12■□□□□ 0.65
SRP9P49458 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SRP9P49458 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SRP9P49458 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.12■□□□□ 0.65
SRP9P49458 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRP9P49458 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.12■□□□□ 0.65
SRP9P49458 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.11■□□□□ 0.65
SRP9P49458 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRP9P49458 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRP9P49458 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.11■□□□□ 0.65
SRP9P49458 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRP9P49458 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.11■□□□□ 0.65
SRP9P49458 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.1■□□□□ 0.65
SRP9P49458 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRP9P49458 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRP9P49458 FAM99A-202ENST00000538190 1989 ntBASIC19.1■□□□□ 0.65
SRP9P49458 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
SRP9P49458 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP9P49458 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.1■□□□□ 0.65
SRP9P49458 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 AL121603.2-201ENST00000557373 2117 ntBASIC19.1■□□□□ 0.65
SRP9P49458 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SRP9P49458 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SRP9P49458 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRP9P49458 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
SRP9P49458 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.09■□□□□ 0.65
SRP9P49458 AC008406.3-201ENST00000620001 1374 ntBASIC19.09■□□□□ 0.65
SRP9P49458 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.09■□□□□ 0.65
SRP9P49458 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 SRD5A1P1-201ENST00000442297 786 ntBASIC19.09■□□□□ 0.65
SRP9P49458 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SRP9P49458 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRP9P49458 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.09■□□□□ 0.65
SRP9P49458 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SRP9P49458 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SRP9P49458 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SRP9P49458 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.08■□□□□ 0.65
SRP9P49458 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms